Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0735 ATGGCAATGCGAGTGGTGCTGTCATTGACTCTTCTCTTCATTCTCATTGGGGTCGCCCAGGCCCAGCTCTCCCTCAACTTCTACAATTCAACGTGCCCAAATGTCGAACAAATCGTTCGCCAGGCCGTCACCCTAAAGTTTAATCAAACATTCATTACTGTTCCCGCAACTCTAAGGCTCTTCTTCCATGACTGCTTTGTTCAGGGATGTGATGCTTCGGTTATGATAGCATCCGCAAGTGGTGATGCAGAAAAAGACGCCGAGGACAACTTGTCATTGGCAGGAGATGGATTTGATACCGTGGTTAAAGCTAAACAAGCAGTGGAAGCTCAATGTCCTGGAATAGTATCGTGTGCGGATGTATTAGCCATCGCTGCAAGGGACGTTGTGGTTTTGGCAAGAGGGCCAAATTTCGCTGTTGAATTAGGACGGCGAGATGGGCTAATCTCGAAAGCATCTTTAGTAGCCGGAAACTTACCGGGACCAAACTTCAACTTGAGCGAATTAAACGCAATGTTCGCCAAAAACAACCTAACCCAAACCGAAATGATTACGTTATCAGGAGCTCACACGGTTGGGTTCTCACATTGCAACCGTTTTGCGAACCGTCTCTACAACTTCTCGGCCACGTCTAATGTGGACCCTTCTCTGGACTCGGACTACGCCCAGCAGCTCATAGACGCCTGCCCACAAAACGTGGATCCCAGAGTGGCTGTGGACATGGACCCTATTACCCCAAGGAAAATGGATAATGTGTATTACCAAAATCTTGTGAACCACAAGGGGCTATTCACGTCGGATCAGGTGCTTTTTACGGACCCGTTGTCGCAACCGACGGTGAGTGGCTTTGCTAATGACAATCATGGGTTCAAGAAAGCGTTTGCGGCGGCTATGGTTCAGCTTGGGAGAGTGGGGGTTAAGACTGGGGTTTTAGGTGAGATTAGAACTGATTGTACTGCATTTAATTCCTAA 972 48.15 MAMRVVLSLTLLFILIGVAQAQLSLNFYNSTCPNVEQIVRQAVTLKFNQTFITVPATLRLFFHDCFVQGCDASVMIASASGDAEKDAEDNLSLAGDGFDTVVKAKQAVEAQCPGIVSCADVLAIAARDVVVLARGPNFAVELGRRDGLISKASLVAGNLPGPNFNLSELNAMFAKNNLTQTEMITLSGAHTVGFSHCNRFANRLYNFSATSNVDPSLDSDYAQQLIDACPQNVDPRVAVDMDPITPRKMDNVYYQNLVNHKGLFTSDQVLFTDPLSQPTVSGFANDNHGFKKAFAAAMVQLGRVGVKTGVLGEIRTDCTAFNS 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9140161 9141758 + CaPI482276_11g007350.1 Cam11g0735 139657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0735 323 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 Pfam Peroxidase 39 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cam11g0735 323 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 ProSiteProfiles Plant heme peroxidase family profile. 22 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 Gene3D Peroxidase, domain 2 160 301 - -
Cam11g0735 323 FunFam Peroxidase 26 168 - -
Cam11g0735 323 FunFam Peroxidase 160 301 - -
Cam11g0735 323 PANTHER - 9 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 SUPERFAMILY Heme-dependent peroxidases 22 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0735 323 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601(InterPro)
Cam11g0735 323 Gene3D - 26 322 - -
Cam11g0735 323 CDD secretory_peroxidase 22 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1268 Cam-Chr2:24974905 Cam11g0735 Cam-Chr11:9140161 2.10E-115 dispersed
Cam03g0646 Cam-Chr3:7322370 Cam11g0735 Cam-Chr11:9140161 2.40E-74 dispersed
Cam05g0924 Cam-Chr5:8375598 Cam11g0735 Cam-Chr11:9140161 1.20E-68 dispersed
Cam05g1921 Cam-Chr5:28139455 Cam11g0735 Cam-Chr11:9140161 5.60E-102 dispersed
Cam11g0735 Cam-Chr11:9140161 Cam11g0737 Cam-Chr11:9185649 2.20E-122 dispersed
Cam11g0735 Cam-Chr11:9140161 Cam11g0736 Cam-Chr11:9148457 3.10E-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0735 K00430 - csv:101213098 558.14