Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0738 ATGGGTCGGTGGAATGAGAAACTTGTAGCCTTTATTAACAATAGATGGTTAGTTTTTGTGGCTGCAATATGGCTTCAATCATGCGCTGGAATTGGGTATCTTTTTGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAATCAGAGGCAAATTGCACGTCTCGGTGTCGCGAAAGACCTTGGCGACAGCGTCGGCATTTTGGCCGCAACCTTGTCGGAGATACTGCCCTTCTGGGGAGCTCTCTTGGTCGGTGCTATCCATAACTTTGTTGGGTATGGTTGGATTTGGCTCATCGTCTCTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTATGGGAACGAATGGGGAGACGTACTTCAATACAGTTTCACTGGTTTCTTGCGTACAAAACTTTCCGAAAAGTAGGGGCCCTGTGGTTGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCAATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGTGTGATGTTTTTAATCAGACCTGTGGCCGGTCATAGACAAGTAAGGCCGTCCGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCTTATTTGATGGGAGTCATGCTTGTTGAGGATCTCGTTACCTTGAGCCCCACTGTGATAGGCATTTTTACTGCAGTTATGTTTGTCATCCTTCTTACGCCCTTTTTGATTCCGGTGACATTGACTTTTAGCTCGGAGACGACAACATATGCTGAGCAAGAGGCTCTCCTACCACCGTCAGAGAAACAAGAACCTGCTAGAACTGAACCAGATGGTAATGAAGTGATATTTAGTGAGGTGGAAGACGAAAAATCAGAGGGAGAGGACTTACTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAATTGCAAGCGAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTCAAGAGGAGGAAGGGTCCACGTAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTTCCTCCCATCTCCTTGGTTCTGGAACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTATGATAATACACATATTTTCGTATCCCTGATCAGCATATGGAACTTTCTCGGCCGTGTTGGTGGTGGATACCTCTCTGAGATTGTTGTGAGAGATTTTGCTTATCCAAGACCCATTGCAATGACGATTGCACAATTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCTGGGGCAATGTACATTGGTACTCTCATAACGGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTATACAACTTCATCACTCTCTCAACTCCTGTAGGATCGCTGATATTTTCTGGCTTAATCGCGAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCTCATAATCACATCTCACAGCTGCAGAGCTCCTCGTCATTTTGGTTCACTAGACTCTACGCCGATGGACCGCACAAGTGCGAGGGTGCTATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCGATTGCAGGCATGTTAAGTTTAATCTTGGTGTATCGGACGAGGGGGGTTTACTACAACCTCTATGGAAAATCTCGTACATCAACGCTTTCGTAG 1791 45.56 MGRWNEKLVAFINNRWLVFVAAIWLQSCAGIGYLFGSISPVIKTNLSYNQRQIARLGVAKDLGDSVGILAATLSEILPFWGALLVGAIHNFVGYGWIWLIVSGRAPVLPLWAMCVLVFMGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSANLIFMIAVGPALVAIGVMFLIRPVAGHRQVRPSDGMSFTSVYGVCLLLAAYLMGVMLVEDLVTLSPTVIGIFTAVMFVILLTPFLIPVTLTFSSETTTYAEQEALLPPSEKQEPARTEPDGNEVIFSEVEDEKSEGEDLLPASERQKRIAQLQAKLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFSSHLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYLSEIVVRDFAYPRPIAMTIAQFLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFITLSTPVGSLIFSGLIASSIYDSEAEKQAHNHISQLQSSSSFWFTRLYADGPHKCEGAICFFLTCMIMAGFCAIAGMLSLILVYRTRGVYYNLYGKSRTSTLS 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9204577 9207211 - CaPI482276_11g007380.1 Cam11g0738 139660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0738 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 586 - GO:0016020(PANTHER)
Cam11g0738 596 CDD MFS_Mch1p_like 15 568 - -
Cam11g0738 596 Coils Coil 316 336 - -
Cam11g0738 596 MobiDBLite consensus disorder prediction 278 297 - -
Cam11g0738 596 SUPERFAMILY MFS general substrate transporter 212 581 IPR036259 -
Cam11g0738 596 Gene3D MFS general substrate transporter like domains 364 581 IPR036259 -
Cam11g0738 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cam11g0738 596 Pfam Nodulin-like 15 262 IPR010658 -
Cam11g0738 596 SUPERFAMILY MFS general substrate transporter 10 202 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1327 Cam-Chr7:27616830 Cam11g0738 Cam-Chr11:9204577 2.40E-92 dispersed
Cam08g1228 Cam-Chr8:18654438 Cam11g0738 Cam-Chr11:9204577 6.00E-81 dispersed
Cam10g1964 Cam-Chr10:33579453 Cam11g0738 Cam-Chr11:9204577 2.00E-56 dispersed
Cam10g1967 Cam-Chr10:33606239 Cam11g0738 Cam-Chr11:9204577 1.40E-37 dispersed
Cam11g0738 Cam-Chr11:9204577 Cam02g1231 Cam-Chr2:24431361 1.60E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0738 - - - 0.0