Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0745 ATGGATCATCAGTTCCAAGAAGAAAGTAGTGTGAAAAAAACAAGTAGTGGATCTATGAAATCGGAGAAGAAGATAAGAAAAGGGAGATTTGCGTTTGAAACCAGGAGCCAAGTTGATGTGCTTGACGATGGCTATCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACGACAAGTTTCCCAGGAGCTACTACAAGTGTTCACATCAAGGATGTAAAGTGAAGAAGCAAATTCAACGGCTTACAAATGATGAAGGAGTGGTATTAACAACCTACGAAGGAGTTCATTCCCATCCCATCGAAACCCCTCAAGATAACTTTCAACATATCTTGACTCACATGCAAATTTACCCTTCTTCCTTTTAA 366 39.62 MDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF 121
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9273109 9274195 - CaPI482276_11g007450.1 Cam11g0745 139667

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0745 121 SUPERFAMILY WRKY DNA-binding domain 34 100 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam11g0745 121 ProSiteProfiles WRKY domain profile. 36 101 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam11g0745 121 SMART WRKY_cls 41 100 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam11g0745 121 Pfam WRKY DNA -binding domain 42 99 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam11g0745 121 Gene3D WRKY domain 25 101 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam11g0745 121 FunFam WRKY transcription factor 57 27 101 - -
Cam11g0745 121 MobiDBLite consensus disorder prediction 1 25 - -
Cam11g0745 121 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 104 IPR044810 GO:0003700(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0745 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1566 Cam-Chr7:30354969 Cam11g0745 Cam-Chr11:9273109 2.40E-44 dispersed
Cam11g0481 Cam-Chr11:6338641 Cam11g0745 Cam-Chr11:9273109 2.80E-23 dispersed
Cam11g0745 Cam-Chr11:9273109 Cam07g0799 Cam-Chr7:20042763 3.20E-26 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cam02g0285 . 156 404 WRKY Transcription Factor Family AT2G04880 57.9 2.1e-78 290.0
Cam03g0015 . 236 476 WRKY Transcription Factor Family AT5G56270 53.6 2.7e-69 260.4
Cam05g2592 . 18 491 WRKY Transcription Factor Family AT2G03340 52.3 6.2e-119 424.9
Cam11g0481 . 12 503 WRKY Transcription Factor Family AT2G03340 52.1 9.9e-117 417.5
Cam03g0015 . 228 489 WRKY Transcription Factor Family AT2G03340 53.2 1.0e-65 248.1
Cam05g2592 . 108 491 WRKY Transcription Factor Family AT1G13960 59.0 1.3e-99 360.1
Cam11g0481 . 139 503 WRKY Transcription Factor Family AT1G13960 51.0 4.3e-82 302.0
Cam03g0015 . 227 517 WRKY Transcription Factor Family AT1G13960 51.2 4.9e-70 261.9
Cam10g2212 . 167 394 WRKY Transcription Factor Family AT1G13960 53.7 2.1e-65 246.5
Cam10g0431 . 206 456 WRKY Transcription Factor Family AT1G13960 51.7 8.9e-64 241.1
Cam10g0431 . 25 575 WRKY Transcription Factor Family AT4G26640 53.1 1.4e-134 476.9
Cam11g0481 . 230 469 WRKY Transcription Factor Family AT4G26640 51.6 6.8e-65 245.4
Cam03g0015 . 225 475 WRKY Transcription Factor Family AT5G07100 57.3 7.2e-69 257.3
Cam10g2212 . 152 381 WRKY Transcription Factor Family AT5G07100 57.3 2.7e-68 255.4
Cam02g1987 . 158 386 WRKY Transcription Factor Family AT5G07100 53.9 6.1e-60 227.6
Cam06g1375 . 192 513 WRKY Transcription Factor Family AT4G30935 60.3 1.7e-99 360.1
Cam03g0015 . 234 579 WRKY Transcription Factor Family AT2G38470 56.7 1.5e-96 350.5
Cam10g0374 . 342 626 WRKY Transcription Factor Family AT2G38470 52.1 2.3e-68 256.9
Cam05g2592 . 198 446 WRKY Transcription Factor Family AT2G38470 55.4 2.3e-65 246.9
Cam10g0431 . 214 456 WRKY Transcription Factor Family AT2G38470 52.9 3.2e-62 236.5
Cam03g0015 . 236 476 WRKY Transcription Factor Family AT4G26440 51.9 9.7e-65 245.0
Cam05g1512 . 74 165 WRKY Transcription Factor Family AT3G01970 77.2 1.2e-38 156.4
Cam07g1566 . 98 192 WRKY Transcription Factor Family AT3G01970 72.6 5.9e-38 154.1
Cam11g0745 . 1 118 WRKY Transcription Factor Family AT3G01970 57.1 7.7e-38 153.7
Cam06g1779 . 202 362 WRKY Transcription Factor Family AT1G62300 56.4 3.3e-41 166.8
Cam05g1152 . 216 328 WRKY Transcription Factor Family AT1G62300 69.9 4.7e-40 162.9
Cam05g1152 . 65 327 WRKY Transcription Factor Family AT1G68150 52.5 6.8e-59 224.9
Cam02g0217 . 294 391 WRKY Transcription Factor Family AT1G68150 75.5 3.9e-38 156.0
Cam01g2233 . 333 430 WRKY Transcription Factor Family AT1G68150 74.5 5.6e-37 152.1
Cam01g2233 . 42 577 WRKY Transcription Factor Family AT4G22070 50.6 1.6e-109 393.7
Cam05g1152 . 208 328 WRKY Transcription Factor Family AT4G22070 66.1 5.1e-39 159.5
Cam06g1779 . 193 362 WRKY Transcription Factor Family AT4G22070 53.2 1.3e-37 154.8
Cam02g0217 . 108 516 WRKY Transcription Factor Family AT4G04450 51.7 1.3e-90 330.5
Cam06g1779 . 202 371 WRKY Transcription Factor Family AT4G04450 54.7 5.2e-42 169.1
Cam02g0217 . 293 381 WRKY Transcription Factor Family AT1G18860 76.4 2.1e-37 154.1
Cam05g0011 . 42 240 WRKY Transcription Factor Family AT2G44745 54.8 4.3e-53 204.9
Cam02g0105 . 113 232 WRKY Transcription Factor Family AT2G44745 62.4 6.6e-38 154.5
Cam01g1630 . 140 226 WRKY Transcription Factor Family AT2G44745 77.0 7.3e-37 151.0
Cam02g0105 . 139 246 WRKY Transcription Factor Family AT4G39410 78.8 1.2e-45 180.6
Cam01g1630 . 133 243 WRKY Transcription Factor Family AT4G39410 72.1 2.4e-41 166.4
Cam07g0799 . 90 186 WRKY Transcription Factor Family AT5G41570 80.4 1.1e-43 173.3
Cam01g2492 . 85 258 WRKY Transcription Factor Family AT4G18170 54.3 2.8e-45 179.5
Cam09g2282 . 118 220 WRKY Transcription Factor Family AT4G18170 74.8 1.0e-39 161.0
Cam05g0783 . 167 341 WRKY Transcription Factor Family AT5G49520 50.8 2.6e-40 163.3
Cam09g2282 . 108 266 WRKY Transcription Factor Family AT5G49520 54.3 1.4e-38 157.5
Cam01g2492 . 86 183 WRKY Transcription Factor Family AT5G49520 73.5 9.3e-38 154.8
Cam07g0799 . 79 188 WRKY Transcription Factor Family AT1G64000 78.2 2.3e-45 179.1
Cam05g0151 . 75 168 WRKY Transcription Factor Family AT1G64000 70.2 8.6e-37 150.6
Cam08g1480 . 109 288 WRKY Transcription Factor Family AT1G69310 59.6 3.1e-51 199.1
Cam06g0441 . 136 227 WRKY Transcription Factor Family AT1G69310 78.3 5.1e-38 155.2
Cam01g2492 . 77 250 WRKY Transcription Factor Family AT1G29860 58.2 7.5e-50 194.5
Cam09g2282 . 102 217 WRKY Transcription Factor Family AT1G29860 68.1 1.6e-39 160.2
Cam07g1566 . 94 192 WRKY Transcription Factor Family AT5G13080 82.8 3.2e-44 174.9
Cam05g1512 . 71 167 WRKY Transcription Factor Family AT5G13080 81.4 1.9e-41 165.6
Cam11g0745 . 3 119 WRKY Transcription Factor Family AT5G13080 69.4 2.1e-40 162.2
Cam05g2845 . 1 286 WRKY Transcription Factor Family AT4G31550 61.2 2.4e-82 302.4
Cam06g1521 . 1 224 WRKY Transcription Factor Family AT4G31550 50.7 7.5e-52 201.1
Cam05g2845 . 1 342 WRKY Transcription Factor Family AT2G24570 60.8 3.2e-105 378.6
Cam09g0739 . 198 343 WRKY Transcription Factor Family AT2G24570 54.7 1.9e-41 166.8
Cam07g0065 . 1 339 WRKY Transcription Factor Family AT2G30590 53.4 5.1e-86 315.1
Cam09g0739 . 2 353 WRKY Transcription Factor Family AT2G30590 50.8 6.7e-86 314.7
Cam05g2221 . 213 372 WRKY Transcription Factor Family AT2G30590 59.9 6.1e-47 185.3
Cam01g1744 . 119 282 WRKY Transcription Factor Family AT2G30590 57.2 6.3e-44 175.3
Cam02g0826 . 156 281 WRKY Transcription Factor Family AT2G30590 68.2 6.3e-44 175.3
Cam05g2845 . 162 323 WRKY Transcription Factor Family AT2G30590 56.1 1.0e-41 167.9
Cam06g1521 . 120 262 WRKY Transcription Factor Family AT2G30590 55.8 1.5e-40 164.1
Cam07g0065 . 1 339 WRKY Transcription Factor Family AT5G28650 50.7 9.9e-78 287.3
Cam09g0739 . 2 353 WRKY Transcription Factor Family AT5G28650 51.6 9.9e-78 287.3
Cam01g1744 . 132 283 WRKY Transcription Factor Family AT5G28650 61.8 6.1e-43 171.8
Cam02g0826 . 177 283 WRKY Transcription Factor Family AT5G28650 72.0 1.3e-40 164.1
Cam01g2599 . 187 308 WRKY Transcription Factor Family AT1G30650 82.0 3.1e-55 213.0
Cam05g0153 . 134 230 WRKY Transcription Factor Family AT1G30650 65.5 8.5e-37 151.8
Cam03g0871 . 149 288 WRKY Transcription Factor Family AT4G01250 56.8 4.1e-38 155.6
Cam05g0153 . 138 238 WRKY Transcription Factor Family AT5G52830 73.5 3.0e-40 162.9
Cam03g0871 . 3 277 WRKY Transcription Factor Family AT2G34830 50.5 1.1e-60 231.1
Cam01g2599 . 186 308 WRKY Transcription Factor Family AT2G34830 82.9 4.8e-56 215.7
Cam05g0153 . 135 230 WRKY Transcription Factor Family AT2G34830 67.9 1.3e-37 154.5
Cam03g0692 . 48 248 WRKY Transcription Factor Family AT1G29280 53.6 1.9e-52 203.0
Cam07g0260 . 42 300 WRKY Transcription Factor Family AT3G58710 55.2 4.4e-47 185.3
Cam05g1039 . 55 211 WRKY Transcription Factor Family AT5G24110 51.0 1.2e-37 154.1
Cam02g0285 . 156 404 WRKY Transcription Factor Family AT2G04880 57.9 2.1e-78 290.0
Cam05g2845 . 1 286 WRKY Transcription Factor Family AT4G31550 61.2 2.4e-82 302.4
Cam06g1521 . 1 224 WRKY Transcription Factor Family AT4G31550 50.7 7.5e-52 201.1
Cam05g0011 . 42 240 WRKY Transcription Factor Family AT2G44745 54.8 4.3e-53 204.9
Cam02g0105 . 113 232 WRKY Transcription Factor Family AT2G44745 62.4 6.6e-38 154.5
Cam01g1630 . 140 226 WRKY Transcription Factor Family AT2G44745 77.0 7.3e-37 151.0
Cam02g0105 . 139 246 WRKY Transcription Factor Family AT4G39410 78.8 1.2e-45 180.6
Cam01g1630 . 133 243 WRKY Transcription Factor Family AT4G39410 72.1 2.4e-41 166.4
Cam01g2599 . 187 308 WRKY Transcription Factor Family AT1G30650 82.0 3.1e-55 213.0
Cam05g0153 . 134 230 WRKY Transcription Factor Family AT1G30650 65.5 8.5e-37 151.8
Cam05g2845 . 1 342 WRKY Transcription Factor Family AT2G24570 60.8 3.2e-105 378.6
Cam09g0739 . 198 343 WRKY Transcription Factor Family AT2G24570 54.7 1.9e-41 166.8
Cam03g0015 . 236 476 WRKY Transcription Factor Family AT5G56270 53.6 2.7e-69 260.4
Cam10g0431 . 25 575 WRKY Transcription Factor Family AT4G26640 53.1 1.4e-134 476.9
Cam11g0481 . 230 469 WRKY Transcription Factor Family AT4G26640 51.6 6.8e-65 245.4
Cam07g0065 . 1 339 WRKY Transcription Factor Family AT2G30590 53.4 5.1e-86 315.1
Cam09g0739 . 2 353 WRKY Transcription Factor Family AT2G30590 50.8 6.7e-86 314.7
Cam05g2221 . 213 372 WRKY Transcription Factor Family AT2G30590 59.9 6.1e-47 185.3
Cam01g1744 . 119 282 WRKY Transcription Factor Family AT2G30590 57.2 6.3e-44 175.3
Cam02g0826 . 156 281 WRKY Transcription Factor Family AT2G30590 68.2 6.3e-44 175.3
Cam05g2845 . 162 323 WRKY Transcription Factor Family AT2G30590 56.1 1.0e-41 167.9
Cam06g1521 . 120 262 WRKY Transcription Factor Family AT2G30590 55.8 1.5e-40 164.1
Cam03g0871 . 149 288 WRKY Transcription Factor Family AT4G01250 56.8 4.1e-38 155.6
Cam07g0799 . 90 186 WRKY Transcription Factor Family AT5G41570 80.4 1.1e-43 173.3
Cam03g0015 . 225 475 WRKY Transcription Factor Family AT5G07100 57.3 7.2e-69 257.3
Cam10g2212 . 152 381 WRKY Transcription Factor Family AT5G07100 57.3 2.7e-68 255.4
Cam02g1987 . 158 386 WRKY Transcription Factor Family AT5G07100 53.9 6.1e-60 227.6
Cam05g0153 . 138 238 WRKY Transcription Factor Family AT5G52830 73.5 3.0e-40 162.9
Cam01g2492 . 85 258 WRKY Transcription Factor Family AT4G18170 54.3 2.8e-45 179.5
Cam09g2282 . 118 220 WRKY Transcription Factor Family AT4G18170 74.8 1.0e-39 161.0
Cam05g2592 . 18 491 WRKY Transcription Factor Family AT2G03340 52.3 6.2e-119 424.9
Cam11g0481 . 12 503 WRKY Transcription Factor Family AT2G03340 52.1 9.9e-117 417.5
Cam03g0015 . 228 489 WRKY Transcription Factor Family AT2G03340 53.2 1.0e-65 248.1
Cam05g1039 . 55 211 WRKY Transcription Factor Family AT5G24110 51.0 1.2e-37 154.1
Cam01g2233 . 42 577 WRKY Transcription Factor Family AT4G22070 50.6 1.6e-109 393.7
Cam05g1152 . 208 328 WRKY Transcription Factor Family AT4G22070 66.1 5.1e-39 159.5
Cam06g1779 . 193 362 WRKY Transcription Factor Family AT4G22070 53.2 1.3e-37 154.8
Cam06g1375 . 192 513 WRKY Transcription Factor Family AT4G30935 60.3 1.7e-99 360.1
Cam03g0015 . 234 579 WRKY Transcription Factor Family AT2G38470 56.7 1.5e-96 350.5
Cam10g0374 . 342 626 WRKY Transcription Factor Family AT2G38470 52.1 2.3e-68 256.9
Cam05g2592 . 198 446 WRKY Transcription Factor Family AT2G38470 55.4 2.3e-65 246.9
Cam10g0431 . 214 456 WRKY Transcription Factor Family AT2G38470 52.9 3.2e-62 236.5
Cam03g0015 . 236 476 WRKY Transcription Factor Family AT4G26440 51.9 9.7e-65 245.0
Cam03g0871 . 3 277 WRKY Transcription Factor Family AT2G34830 50.5 1.1e-60 231.1
Cam01g2599 . 186 308 WRKY Transcription Factor Family AT2G34830 82.9 4.8e-56 215.7
Cam05g0153 . 135 230 WRKY Transcription Factor Family AT2G34830 67.9 1.3e-37 154.5
Cam05g2592 . 108 491 WRKY Transcription Factor Family AT1G13960 59.0 1.3e-99 360.1
Cam11g0481 . 139 503 WRKY Transcription Factor Family AT1G13960 51.0 4.3e-82 302.0
Cam03g0015 . 227 517 WRKY Transcription Factor Family AT1G13960 51.2 4.9e-70 261.9
Cam10g2212 . 167 394 WRKY Transcription Factor Family AT1G13960 53.7 2.1e-65 246.5
Cam10g0431 . 206 456 WRKY Transcription Factor Family AT1G13960 51.7 8.9e-64 241.1
Cam02g0217 . 108 516 WRKY Transcription Factor Family AT4G04450 51.7 1.3e-90 330.5
Cam06g1779 . 202 371 WRKY Transcription Factor Family AT4G04450 54.7 5.2e-42 169.1
Cam05g1512 . 74 165 WRKY Transcription Factor Family AT3G01970 77.2 1.2e-38 156.4
Cam07g1566 . 98 192 WRKY Transcription Factor Family AT3G01970 72.6 5.9e-38 154.1
Cam11g0745 . 1 118 WRKY Transcription Factor Family AT3G01970 57.1 7.7e-38 153.7
Cam05g0783 . 167 341 WRKY Transcription Factor Family AT5G49520 50.8 2.6e-40 163.3
Cam09g2282 . 108 266 WRKY Transcription Factor Family AT5G49520 54.3 1.4e-38 157.5
Cam01g2492 . 86 183 WRKY Transcription Factor Family AT5G49520 73.5 9.3e-38 154.8
Cam07g0799 . 79 188 WRKY Transcription Factor Family AT1G64000 78.2 2.3e-45 179.1
Cam05g0151 . 75 168 WRKY Transcription Factor Family AT1G64000 70.2 8.6e-37 150.6
Cam08g1480 . 109 288 WRKY Transcription Factor Family AT1G69310 59.6 3.1e-51 199.1
Cam06g0441 . 136 227 WRKY Transcription Factor Family AT1G69310 78.3 5.1e-38 155.2
Cam06g1779 . 202 362 WRKY Transcription Factor Family AT1G62300 56.4 3.3e-41 166.8
Cam05g1152 . 216 328 WRKY Transcription Factor Family AT1G62300 69.9 4.7e-40 162.9
Cam02g0217 . 293 381 WRKY Transcription Factor Family AT1G18860 76.4 2.1e-37 154.1
Cam03g0692 . 48 248 WRKY Transcription Factor Family AT1G29280 53.6 1.9e-52 203.0
Cam07g0260 . 42 300 WRKY Transcription Factor Family AT3G58710 55.2 4.4e-47 185.3
Cam01g2492 . 77 250 WRKY Transcription Factor Family AT1G29860 58.2 7.5e-50 194.5
Cam09g2282 . 102 217 WRKY Transcription Factor Family AT1G29860 68.1 1.6e-39 160.2
Cam07g0065 . 1 339 WRKY Transcription Factor Family AT5G28650 50.7 9.9e-78 287.3
Cam09g0739 . 2 353 WRKY Transcription Factor Family AT5G28650 51.6 9.9e-78 287.3
Cam01g1744 . 132 283 WRKY Transcription Factor Family AT5G28650 61.8 6.1e-43 171.8
Cam02g0826 . 177 283 WRKY Transcription Factor Family AT5G28650 72.0 1.3e-40 164.1
Cam07g1566 . 94 192 WRKY Transcription Factor Family AT5G13080 82.8 3.2e-44 174.9
Cam05g1512 . 71 167 WRKY Transcription Factor Family AT5G13080 81.4 1.9e-41 165.6
Cam11g0745 . 3 119 WRKY Transcription Factor Family AT5G13080 69.4 2.1e-40 162.2
Cam05g1152 . 65 327 WRKY Transcription Factor Family AT1G68150 52.5 6.8e-59 224.9
Cam02g0217 . 294 391 WRKY Transcription Factor Family AT1G68150 75.5 3.9e-38 156.0
Cam01g2233 . 333 430 WRKY Transcription Factor Family AT1G68150 74.5 5.6e-37 152.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000978 3 3 1 1 3 3 4 3 3 2 3 3 3 3 3 3 3 3 3 3 2 3 3 2 3 3 2 3 4 3 84
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52890 PF03106 WRKY 2.40E-25 CL0274 Cam TF