Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0915 | ATGAAAGAGAGATTGAAAAACTATGCTTCTCAAAGGATATTGGCAAATTCCAAACCTTGTCCGAAATGCAAACGTCCTATTGAGAAAAATCAAGGGTGCATGCATATTACTTGCACACCACCTTGTAAATTTGAGTTCTGCTGGCTTTGCCTTGGTCCATGGTCTGATCATGGAGAGAGGACAGGAGGATTTTATGCATGTAATCGCTATGAAACTGCAAAGCAAGAGGGAGTGTATGATGATGCTGAAAAGCGTAGAGAGATGGCCAAGAATTCTCTGGAGAGATATACTCATTATTATGAAAGATGGGCTACAAACCAATCGATGCTCTTCCGCTCTTTGACTTCTCCATCCACCGCCAACTTTGACTACCATAGTTTGTCCTTGGCCTTTTGTCGGCACCTTCGGCGCCTCTTCAAGGTGGTCCCTTCATCGTTACCCTCTCTCTCTCCCACCTTATGTGATCGTCAACTACCCTCTTACTTTCGTCTCTGTCTTCTCCAAACACCGCCAGCTCTGAGCTCTGTCCTCTGTCAACCATCCTCGGCCTTCTGCTCACCCTCGGCCGCCACTTCATACGTACTGCTTTCTCCTAAATTTTCTGGCCCTTCATCGTCTTCTTCACCAATCATTGACTGTGATGCAGAAACAATGGTCAGTCTTATTGGTTGTGTTCTCGTTTCCTTTGCTAGTTGTCCTTCATTGTTTTATCTTTCTAGGCAAAAGGCACTTGCGGATCTCCATCAAATGCAAACCGTGCATCTCGAAAAGTTAAGTGACATTCAGTGCCAACCTGAGTCACAGCTAAAGTTCATAAGCGAAGCATGGCTACAGATTGTCGAGTGTAGGCGAGTTCTTAAATGGACTTATGCCTATGGATATTATCTACCTGAGCGTGAACATGCCAAGAGACAATTCTTTGAATACTTGCAAGGTGAGGCTGAGTCTGGGTTGGAACGACTCCACCAATGTGCAGAAAAGGAGTTGCATGCTTACCTAAATGCTGCTGATGGTCCTTCAAAAGATTTCAATGAGTTCCGTACCAAACTTGCTGGACTAACCAGTGTAACTCGGAATTACTTCGAGAATTTAGTACGTGCACTTGAGAATGGTCTGTCAGATGTGGATTCCCATGGTACCTGCAGCAAAACAGTAAGCTCAAAGAGTACTAGTGGCTGTAGGAGTAAAGGTGGGAAAGGCAAGATGAGTGCATCCAGAGCTAGCGGTTCGAGTCGAAACATTGATGATACTGACCATTGGTCTTGTGAACATTGCACCTTTGCGAATGTTAAATCAGCTACCTTCTGCCAGATGTGCCAGCAACGGCGATAA | 1332 | 45.05 | MKERLKNYASQRILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGPWSDHGERTGGFYACNRYETAKQEGVYDDAEKRREMAKNSLERYTHYYERWATNQSMLFRSLTSPSTANFDYHSLSLAFCRHLRRLFKVVPSSLPSLSPTLCDRQLPSYFRLCLLQTPPALSSVLCQPSSAFCSPSAATSYVLLSPKFSGPSSSSSPIIDCDAETMVSLIGCVLVSFASCPSLFYLSRQKALADLHQMQTVHLEKLSDIQCQPESQLKFISEAWLQIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSHGTCSKTVSSKSTSGCRSKGGKGKMSASRASGSSRNIDDTDHWSCEHCTFANVKSATFCQMCQQRR | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13101398 | 13110893 | - | CaPI482276_11g009150.1 | Cam11g0915 | 139837 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0915 | 443 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 416 | 443 | IPR001876 | - | |
Cam11g0915 | 443 | CDD | Rcat_RBR_ARI7-like | 16 | 70 | - | - | |
Cam11g0915 | 443 | MobiDBLite | consensus disorder prediction | 377 | 396 | - | - | |
Cam11g0915 | 443 | SMART | zf_4 | 418 | 442 | IPR001876 | - | |
Cam11g0915 | 443 | SUPERFAMILY | RING/U-box | 13 | 60 | - | - | |
Cam11g0915 | 443 | ProSitePatterns | Zinc finger RanBP2-type signature. | 420 | 439 | IPR001876 | - | |
Cam11g0915 | 443 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 16 | 108 | IPR031127 | GO:0000151(PANTHER)|GO:0000209(PANTHER)|GO:0004842(InterPro)|GO:0005737(PANTHER)|GO:0006511(PANTHER)|GO:0016567(InterPro)|GO:0031624(PANTHER)|GO:0032436(PANTHER)|GO:0061630(PANTHER) | |
Cam11g0915 | 443 | ProSiteProfiles | TRIAD supradomain profile. | 1 | 71 | IPR044066 | - | |
Cam11g0915 | 443 | SUPERFAMILY | Ran binding protein zinc finger-like | 416 | 443 | IPR036443 | - | |
Cam11g0915 | 443 | MobiDBLite | consensus disorder prediction | 377 | 414 | - | - | |
Cam11g0915 | 443 | Gene3D | - | 2 | 123 | - | - | |
Cam11g0915 | 443 | Gene3D | - | 237 | 375 | - | - | |
Cam11g0915 | 443 | Gene3D | - | 409 | 443 | - | - | |
Cam11g0915 | 443 | Pfam | IBR domain | 15 | 55 | - | - | |
Cam11g0915 | 443 | SMART | ibrneu5 | 3 | 67 | IPR002867 | GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam08g0887 | Cam-Chr8:13182191 | Cam11g0915 | Cam-Chr11:13101398 | 1.70E-125 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0915 | K11968 | - | csv:101218052 | 401.364 |