Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0920 ATGGAATCGGAGGACGAGCTCGACATGCACGATGCCCATGACGACGACGGCTCTGTTGACAATGAGGAGGACTTCTACAGTGGCGGCGACGACGATGGTGCCGCCATCGACAGCGACGATGCTGATGTCGGTGATTACGAGTTTGTTGATAATGATTCCGACGATTCCGACGACATGGTCTCCTATCGCCACCAGCAAAATTATATAATCTTGGCCGAGGCAGATATACAGCAGCGGCAGGAGGAAGACATCATGAGAGTATCCACTGTTCTTTCGATTTCAAAAGTAGCTGCTAGCATCTTGCTTCGATATTACAACTGGAGTGTCAGTAAAGTGCATGATGAATGGTTTGCAGACGAAGAAAAGGTCCGTAGATCTGTTGGCTTACTAGAAAAACCAGTTTTGCGACATTCAAATGAACTAGAACTACCTTGTGGTATATGTTTTGAAATCTATTCACGTGATAAGATCCAGTCTGCTGCTTGTGGCCATCCATTTTGCAATGCGTGTTGGACAGTTTCTTAG 525 46.29 MESEDELDMHDAHDDDGSVDNEEDFYSGGDDDGAAIDSDDADVGDYEFVDNDSDDSDDMVSYRHQQNYIILAEADIQQRQEEDIMRVSTVLSISKVAASILLRYYNWSVSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSAACGHPFCNACWTVS 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13150063 13157909 - CaPI482276_11g009200.1 Cam11g0920 139842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0920 174 MobiDBLite consensus disorder prediction 1 58 - -
Cam11g0920 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 173 IPR013083 -
Cam11g0920 174 MobiDBLite consensus disorder prediction 1 55 - -
Cam11g0920 174 Pfam E3 ubiquitin-protein ligase ARIH1, UBA-like domain 78 117 IPR048962 -
Cam11g0920 174 SUPERFAMILY RING/U-box 144 170 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0920 K11968 - csv:101218052 290.812