Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam11g0930 | ATGATGAGTTTAAGAAGTGGAGTAGTGTTGGGAGTGATAACGTGGTTGGTTTGGACATGGATCATTGTTCATAGATGGAACCAAAGGAAGAAGACGACAGGTCCTAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTTTTAAATTACCACAGAATGCATGATTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTGGTTCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCCAATGTTCAGCATATTCTCAAGACCAACTTTGCTAATTATCCCAAGGGTGATGTGTATCATTCATATATGGAAGTGCTTCTTGGAGATGGGATATTCAACGTAGATGGAGAGCTATGGAGAAAACAGAGGAAAACTGCGAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTCAGAGAGTACACTCTGAAGCTATCAAATATTTTAACAAGGGCCTCTTTAGACAACCAACAAATTGACATGCAGGAATTGTTGATGAGAATGACCTTAGACTCGATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCATTGGCTCCAAATTTGCCAGAAAATGGGTTTGCTAAGGCGTTTGACACAGCCAACATGATCGTCACCCTTCGTTTCATCGATCCTTTATGGAAAATTAAAAGATTTCTGAATTTGGGATCTGAAGCTCTTCTTGATAGGTCCATTAAAATCATCGATGATTTCACCTACTCTGTCATTGCCACTAGGAAAAAAGAGATGCAACAACAACCTCAAACCACATCCAAAGATGTCAATAAGGAGAAAAAACATGACATATTGTCAAGGTTTATTGAGTTAGGCGAAGACCCAAACAACAATTTCACAAACAAAAGCTTAAGAGATGTTGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTCACAAACTTTACTCAGAGCTCAAGAATTTCGAAGAAGAAAGAGCCAAAGAAGAAAACATTTCATTGCTTCAATATCAACCAACTGATCTTCAATCCTTTGAGAGAAGAGTAATGCAATTTTCACAAATCCTCAATTATGATTCCCTTGCTCGATTACACTATTTGCATGCTACCATCACTGAGACACTTCGTCTTTACCCTGCAGTCCCTCAGGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGTACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTGTGATGCAACTTCATTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATTTGCATGGGAAAGGACTCAGCATATCTACAGATGAAAATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTGAGTGGGCATCGAGTCAACTACAGAATGATGACTATTCTCTCCATGGCTAATGGCTTGAAAGTTACCGTGGCTCCACGCTCTTAA | 1587 | 40.01 | MMSLRSGVVLGVITWLVWTWIIVHRWNQRKKTTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYTLKLSNILTRASLDNQQIDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPLWKIKRFLNLGSEALLDRSIKIIDDFTYSVIATRKKEMQQQPQTTSKDVNKEKKHDILSRFIELGEDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVAHKLYSELKNFEEERAKEENISLLQYQPTDLQSFERRVMQFSQILNYDSLARLHYLHATITETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGCDATSFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHRVNYRMMTILSMANGLKVTVAPRS | 528 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 14600981 | 14615480 | - | CaPI482276_11g009300.1 | Cam11g0930 | 139852 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam11g0930 | 528 | Gene3D | Cytochrome P450 | 18 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | FunFam | Alkane hydroxylase MAH1 | 27 | 528 | - | - | |
| Cam11g0930 | 528 | Pfam | Cytochrome P450 | 34 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | Pfam | Cytochrome P450 | 367 | 518 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | CDD | CYP86A | 66 | 520 | - | - | |
| Cam11g0930 | 528 | PRINTS | P450 superfamily signature | 475 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | PRINTS | P450 superfamily signature | 466 | 475 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | PRINTS | P450 superfamily signature | 388 | 399 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | PANTHER | CYTOCHROME P450 | 20 | 520 | - | - | |
| Cam11g0930 | 528 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | PRINTS | E-class P450 group I signature | 387 | 405 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | PRINTS | E-class P450 group I signature | 465 | 475 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | PRINTS | E-class P450 group I signature | 475 | 498 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | SUPERFAMILY | Cytochrome P450 | 24 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0930 | 528 | Coils | Coil | 331 | 351 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g0236 | Cam-Chr5:2314175 | Cam11g0930 | Cam-Chr11:14600981 | 5.70E-109 | dispersed | |
| Cam05g0239 | Cam-Chr5:2369526 | Cam11g0930 | Cam-Chr11:14600981 | 9.90E-109 | dispersed | |
| Cam10g1877 | Cam-Chr10:32790805 | Cam11g0930 | Cam-Chr11:14600981 | 5.20E-75 | dispersed | |
| Cam11g0930 | Cam-Chr11:14600981 | Cam05g2796 | Cam-Chr5:35104019 | 8.50E-15 | dispersed | |
| Cam11g0930 | Cam-Chr11:14600981 | Cam06g0370 | Cam-Chr6:5797109 | 2.10E-101 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam11g0930 | K20495 | - | csv:101222076 | 928.317 |