Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0973 ATGTGCTTAGTTAAAGGGTTCCTCACGGATCGGTACTCTGAAACTGGTGGGCGTCGGGGTTTCAATCGGGCTGTTGGCCTGGAGTGCATTCTAAGCATTGTTAGGGCACTTCGGATGGGGTCCTGCTTGTCTTCGGAGAGCAGGAGCCCCATTCCTGGTTCCCCAACTTCTCCGGCTAAGCATCATCGGAGCAAGAACAGTTCCAAGAGGCGATATGGTTCTAGGAATTCCTCCTTTGGGGATCTCTCACTTCATCGGATCCCCGGCAGGCTCTTCGCTAATGGCTTCACTGATGTCGCGTCTCTGTTCACCCAGCAGGGCAAGAAAGGGACCAATCAGGATGCCATGATTGTTTGGGAGAATTTCGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCATGGTCCCTATGGTCATATGGTTGCAAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTTAACTTGACCACGGATGATGTTCATAGAGAGATCAATCTTAATACAGGAAGTATGAACTCGGATGAAGCTACTTCCTTTTTATCTGCTGAAGAAGAGTCAAGGGCCTCCACTGATGTTGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTCTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACTGGGAACTCAGAATGCACCAAACTATAGATAGCTTCTGTAGTGGGACTACAGCAGTGACTATTGTTAAACAGGGTCAGGATCTTGTCATTGGAAATGTTGGGGACTCCCGAGCTGTTTTGGGTATGAGAGATAAAGATGACTCGCTTGTTGCCATTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAGGTGTAGAGGTCGTGTCTTTGCTCTCCAAGATGAACCTGATGTAGCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCACGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCAGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTTCTGTCAAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGTACTATTGCAGCTCGAACTCTGGTCGAAACTGCCATTAAAGCATGGAAACATAAATACCCAACTTCCAAGATTGATGACTGTGCGGTCGTTTGCCTCTTCCTCGACTCAAACTCCAGCAATCTATCATCTGCTTCCAATACCAAACCGGAAGAGCAACAAAGTTTAACAGAACAAGTCAGCACTGCAGTTGAGAATGAAAATTTCTGTGTCCCAAATGGTCTGAATCGTTCAGGAACTGTCCGAACCACCAGCAAGGAGATTTTGCAGGATGGAAGTGATGAAGAAGAAGATGAATTGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGAGTGTCGCGCGTAAACACTTTGGTAACCCTGCCAAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCGGAAGATAAGAAAAGTTATAAAAATTGAAGTTGAGAGAGGTCGGCCCAGCCTTATTAGTGCGTCTGGGGAATTGTTGACACTCTCAGAGAAAGTATTAGAAGCTATCAGCAAGATTTTCTCTCTACTCTCAAGAGGTGAAGGTGTGTCCAATGATGAACTGCCAACTTCTACTTCAGAGGATCATGCCTCTGTGGCATAG 1767 45.73 MCLVKGFLTDRYSETGGRRGFNRAVGLECILSIVRALRMGSCLSSESRSPIPGSPTSPAKHHRSKNSSKRRYGSRNSSFGDLSLHRIPGRLFANGFTDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVHREINLNTGSMNSDEATSFLSAEEESRASTDVDGTEKQPEIFHTLKESFLKAFRVMDWELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLKPNLPAEAERIRRCRGRVFALQDEPDVARVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRTIAARTLVETAIKAWKHKYPTSKIDDCAVVCLFLDSNSSNLSSASNTKPEEQQSLTEQVSTAVENENFCVPNGLNRSGTVRTTSKEILQDGSDEEEDELKEEEHSEMGIEWSALEGVSRVNTLVTLPRFDPGKEDKKGRKIRKVIKIEVERGRPSLISASGELLTLSEKVLEAISKIFSLLSRGEGVSNDELPTSTSEDHASVA 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16193590 16201409 + CaPI482276_11g009730.1 Cam11g0973 139895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0973 588 MobiDBLite consensus disorder prediction 184 204 - -
Cam11g0973 588 CDD PP2Cc 99 418 IPR001932 -
Cam11g0973 588 SUPERFAMILY PP2C-like 99 419 IPR036457 -
Cam11g0973 588 MobiDBLite consensus disorder prediction 45 77 - -
Cam11g0973 588 PANTHER PROTEIN PHOSPHATASE 71 417 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam11g0973 588 MobiDBLite consensus disorder prediction 458 486 - -
Cam11g0973 588 FunFam probable protein phosphatase 2C 33 94 421 - -
Cam11g0973 588 Pfam Protein phosphatase 2C 169 397 IPR001932 -
Cam11g0973 588 Gene3D - 97 420 IPR036457 -
Cam11g0973 588 Coils Coil 469 489 - -
Cam11g0973 588 ProSiteProfiles PPM-type phosphatase domain profile. 99 418 IPR001932 -
Cam11g0973 588 SMART PP2C_4 90 416 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1581 Cam-Chr2:28721974 Cam11g0973 Cam-Chr11:16193590 1.70E-94 dispersed
Cam03g1066 Cam-Chr3:19505095 Cam11g0973 Cam-Chr11:16193590 2.70E-144 dispersed
Cam04g0673 Cam-Chr4:21000108 Cam11g0973 Cam-Chr11:16193590 1.20E-94 dispersed
Cam05g0653 Cam-Chr5:5650384 Cam11g0973 Cam-Chr11:16193590 1.10E-23 dispersed
Cam06g0567 Cam-Chr6:7742050 Cam11g0973 Cam-Chr11:16193590 2.80E-26 dispersed
Cam08g0880 Cam-Chr8:13030032 Cam11g0973 Cam-Chr11:16193590 1.10E-138 dispersed
Cam10g0353 Cam-Chr10:5720285 Cam11g0973 Cam-Chr11:16193590 7.20E-131 dispersed
Cam11g0973 Cam-Chr11:16193590 Cam11g1818 Cam-Chr11:30703321 1.20E-17 dispersed
Cam11g0973 Cam-Chr11:16193590 Cam02g1797 Cam-Chr2:31062390 2.10E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0973 - - - 0.0