Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0999 ATGGAGCATGGAGATGTTGTGTCGAAGGGCATGGCGTCAGACCCTTCGAGTTCATACCAAAAAATCATAATAGTTGCGGCTATTGCAGCCGGAGTCCAATTTGGTTGGGCTCTCCAGCTTTCGTTGCTGACACCTTACGTACAGCAACTTGGAGTTTCACATACATGGTCAGCTTTCATATGGCTTTGTGGGCCATTATCAGGGCTTATTGTCCAACCCACTGTTGGATATTACAGCGATCGTTGCACTTCTAGGTTTGGTCGTCGTCGACCATTCATTGCTGCTGGGGCTGGCTTTGTGGCGGCTGCAGTTTTCCTCATTGGCTTTGCTGCAGATATTGGGCATGCAGCGGGAGATCAACTTGCTGCACGCACAAAACCAAGGGCTGTAGCCATATTTGTTGTCGGATTCTGGGTTCTTGATGTCGCTAACAACATGCTGCAAGGCCCTTGTAGAGCTTTGTTGGCAGATATGTCAGGTACCAACCACAAGAAGATGAGAATGGCCAATGGTTTTTTCTCCTTCTTCATGGGCGTAGGGAATGTTTTGGGTTACGCAGCTGGGTCCAATAACACACTCTATAAAGTCCTTCCCTTCACAATAACCAAAGCATGTGACACTTACTGTGCCAACCTCAAAACATGCTTCTTGATCGACATTGTGTTTCTCCTCCTCATTACCACCTTTGCCGTGTTTACCGTCAGCGAGAAGCAATTTGAGCGCTTGGAGATTGACGAAGAAGCAACACCCTTTTTCGGGAAGTTGCTTGGAGCACTCAAGAAGTTGGAGAAGCCCATGTGGATCTTGTTACTCGTAACAGCTTTGAACTGGATTGGTTGGTTCCCATTTATAATGTATGACACTGACTGGATGGGTTTGGAAGTGTATGGAGGAAAGCCAAATGGAACTCCAGAACAAGTCAAGTTCTATGACCTTGGTGTTCGTTCTGGGGCCCTTGGGTTGATGATAAACTCCTTTGTTCTAGGATTTTCAGCTTTAGCGATTGAGCCAATTAGCCGTATTCTAGGAGGTCTCAGGTGGTGGTGGGGAATTGTGAACATCATATTCACCATTTGCATGGGATCCACCGTCGTTGTTACAAAGGTTGCTGAGCGCTGGAGGTCCATTAACGGTTTGCGCCTTCCTCCCGCGAACGTTAGGGCCGGAGCTTTTTCCATCTTTGCAGTCTTGGGTATTCCACTATCGGTCACTTTTAGCGTTCCCTTTGCACTTGCATCCATCTTTTCTTCAGAATCTGATGCGGGTCAAGGCCTCTCTTTGGGAATTCTCAACCTCTTCATTGTCATCCCACAGTTCATTGTGTCTGCAGTTAGTGGACCTTTAGATGCAGCTTTCGGAGGTGGAAACTTACCCGCATTCGTACTGGGTGGAATTGCTTCTTTTGCAAGCGCAATGTGCGCTATGTTCGTCCTTCCAGATCCACCACCTCAATCCGAAGTCTCCTTGACAGTGGGGGCCGGCCATTGA 1488 47.85 MEHGDVVSKGMASDPSSSYQKIIIVAAIAAGVQFGWALQLSLLTPYVQQLGVSHTWSAFIWLCGPLSGLIVQPTVGYYSDRCTSRFGRRRPFIAAGAGFVAAAVFLIGFAADIGHAAGDQLAARTKPRAVAIFVVGFWVLDVANNMLQGPCRALLADMSGTNHKKMRMANGFFSFFMGVGNVLGYAAGSNNTLYKVLPFTITKACDTYCANLKTCFLIDIVFLLLITTFAVFTVSEKQFERLEIDEEATPFFGKLLGALKKLEKPMWILLLVTALNWIGWFPFIMYDTDWMGLEVYGGKPNGTPEQVKFYDLGVRSGALGLMINSFVLGFSALAIEPISRILGGLRWWWGIVNIIFTICMGSTVVVTKVAERWRSINGLRLPPANVRAGAFSIFAVLGIPLSVTFSVPFALASIFSSESDAGQGLSLGILNLFIVIPQFIVSAVSGPLDAAFGGGNLPAFVLGGIASFASAMCAMFVLPDPPPQSEVSLTVGAGH 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17843018 17844597 + CaPI482276_11g009990.1 Cam11g0999 139921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0999 495 CDD MFS_SLC45_SUC 31 476 - -
Cam11g0999 495 Gene3D MFS general substrate transporter like domains 16 486 IPR036259 -
Cam11g0999 495 Pfam MFS/sugar transport protein 28 279 - -
Cam11g0999 495 PANTHER SUGAR TRANSPORTER 12 477 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Cam11g0999 495 NCBIfam sucrose/proton symporter 19 482 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Cam11g0999 495 SUPERFAMILY MFS general substrate transporter 22 484 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1654 Cam-Chr8:22778996 Cam11g0999 Cam-Chr11:17843018 2.10E-127 dispersed
Cam09g2225 Cam-Chr9:36779752 Cam11g0999 Cam-Chr11:17843018 1.60E-113 dispersed
Cam11g0999 Cam-Chr11:17843018 Cam11g1005 Cam-Chr11:18286557 1.90E-287 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0999 K15378 - csv:116401998 904.434