Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1152 ATGGCAAAAGGAGGAGCTCAGAAGAAAGATGTGGCGGTGGCGATCGACAAAGACAAATGTAGTCAACAAGCTTTGAAGTGGACAATTGAACGCCTTCTTAGCAGAGGCCAAGTGGTTACTCTGCTTCATGTTAAGCAGAAACCGTCTTCCTCTGCACATTCGATGACGAATATGAGTGCGGATTCGGATGTGGATGAGGCCGCTTTGTATAAACAACAGCTTGATAGTCATGCCAGAGATCAGTTCTTCCTCCCTTTTCGTTGCATTTGCACAAGAAACAATATACCATGCAATGAGGTGATGTTGGAAGAAGGAGAGATTCCAAAGACATTAATAAATTATGTCTCCAAAAATGTTATAGACATTTTAGTACTTGGTGCCCCTACAAGATCAATTTACAAGAGATTCAAGTCAGATGTTCCAAGCAGTGTATCAAAAGGAGCACCAGACTTCTGCACTGTTTACACTATTGGCAACAAAGGCAAGGTTTCAGTGAGACAATCCACAGCTCCACCGCCAGCAAAGCCCGTTGCCCCGCCGCGCACCCAACTGCAGCCCGCCCCACCCCGCCCTCAGCTGCTACATCAGCTCACCAATGCCTCGGAAGTTGCGGCCGAGCCGAACCAGCCACGCTCCCAAGCAGCTAAATCTTTAGATTCTCAAAACAGCATAAATACTCCTCCTCGTGCCGTTCAAGAAGATTGGGACATCAAGTCACCATTTACAAGGCCTGGTTCAAGGGCTTCAATGAGCAAAGTGATGGAACCATTGACGGCGGATTCCGACATATCGTACGTCAGCAGCGGGAGGCGGAGCATGGACCGTGGCTTCCAAGGGGCGTGGAACTCCAGCACTTGCACCGACTCGTATCGCCTTTCTAACGTCTCTGAGTTTGAAGTTTCCAGCCCCGGTCCGGCTTCGCCTATGTTGGAAATGGGAGGAGGAACCAACAAATCATCCATTGATAATACTATCAATGACGATGATAATAATAACAACAACAATAGCAATGTCTCTTCTTACCCTCAAGATATGTCATTTTGCTCTTTACAAAGTGAAACATTCTCTTGGCCTTCCAATTCTCACGCTCAGGATGATGTTGAAGCTGAGATGAGAAGACTGAAATTAGAGCTCAAACAAACCATGGACATGTACAGTACAGCCTGCAAAGAAGCCCTAAACGCCAAGCAGAAGGCGATGGAGCTCCATCGCTGGAAAGTGGAAGAAGAGCAAAGGTTAGAAGAGGCGAGAATGGGAGGGGAAGCAGCATTAGCAATGGCGGAGAAGGAGAAGATGAAATGCAAAGCAGCGATGGAGGCAGCTGAAGCTGCACAAAAGATCGCAGTACTTGAGGCGAGGAAAAGAGCGAACGCGGAGAAAATGGTGGACATGGAAGCACAAGTGGACATGGAAGCACAAGAAACGAAAAGAACACTTTCGCTTTCAGGATTCGGCCATGGAGAAATCGGTTACAGAAGGTACACAATCCAGGAAATTGAAACTGCCACGAAAGGCTTCTCTGATTCTCTAAAGATCGGTGAAGGCGGTTACGGTCCAGTCTTCCGTGGAGAACTTGACCACACACCGGTGGCGATCAAGGTTCTCCGGCCGGATGCTGCTCATGGACGATCACAATTTCAGCAAGAGGTTGAAGTTCTAAGTTGTATTCGTCATCCAAACATGGTTCTCCTTCTTGGAGCGTGTCCTGAAAACGGTTGTTTAGTTTACGAATTCATGGCGAATGGAAGCTTAGAAGACTGTCTCTTTCGAAAAGCAAATGATCCAATTCTTTCATGGCAGTTACGATTCCGAATCGCGGCGGAGATTGCAACCGGACTTCTCTTCCTACACCAGGCCAGACCAGAACCGATTGTACACCGCGATCTGAAACCAGGGAACATTTTGCTAGATAGGAACTACGTGAGCAAAATCAGTGACGTCGGACTGGCGAGGCTGGTTCCTCCATCAGTGGCCGATTCAGTGACTCAATATCGGATGACAGCAACGGCAGGGACATTCTTCTACATCGATCCAGAGTATCAGCAAACAGGATTGCTAGGGATTAAATCGGACATTTACTCGTTGGGCGTGATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCATTCAGCGGTTGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGAAATGATAAGTAGTGTAAATCTGGAGCATTGTGGAGCATGGGTTGAGAGCTCAAGCAGCCAATCAGATAGCAGCATGTCATCATACTCAGGCAAAAGACCTTATTGGCTGGACTAG 2520 48.02 MAKGGAQKKDVAVAIDKDKCSQQALKWTIERLLSRGQVVTLLHVKQKPSSSAHSMTNMSADSDVDEAALYKQQLDSHARDQFFLPFRCICTRNNIPCNEVMLEEGEIPKTLINYVSKNVIDILVLGAPTRSIYKRFKSDVPSSVSKGAPDFCTVYTIGNKGKVSVRQSTAPPPAKPVAPPRTQLQPAPPRPQLLHQLTNASEVAAEPNQPRSQAAKSLDSQNSINTPPRAVQEDWDIKSPFTRPGSRASMSKVMEPLTADSDISYVSSGRRSMDRGFQGAWNSSTCTDSYRLSNVSEFEVSSPGPASPMLEMGGGTNKSSIDNTINDDDNNNNNNSNVSSYPQDMSFCSLQSETFSWPSNSHAQDDVEAEMRRLKLELKQTMDMYSTACKEALNAKQKAMELHRWKVEEEQRLEEARMGGEAALAMAEKEKMKCKAAMEAAEAAQKIAVLEARKRANAEKMVDMEAQVDMEAQETKRTLSLSGFGHGEIGYRRYTIQEIETATKGFSDSLKIGEGGYGPVFRGELDHTPVAIKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPENGCLVYEFMANGSLEDCLFRKANDPILSWQLRFRIAAEIATGLLFLHQARPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDIYSLGVMLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGLRSFSGCSTCSSPYASQTSQEMISSVNLEHCGAWVESSSSQSDSSMSSYSGKRPYWLD 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22609819 22617153 + CaPI482276_11g011520.1 Cam11g1152 140074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1152 839 Coils Coil 364 384 - -
Cam11g1152 839 Pfam Protein kinase domain 509 760 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1152 839 MobiDBLite consensus disorder prediction 192 229 - -
Cam11g1152 839 PANTHER OS02G0152300 PROTEIN 11 799 IPR051348 -
Cam11g1152 839 MobiDBLite consensus disorder prediction 172 187 - -
Cam11g1152 839 MobiDBLite consensus disorder prediction 163 248 - -
Cam11g1152 839 Gene3D HUPs 9 157 IPR014729 -
Cam11g1152 839 ProSiteProfiles Protein kinase domain profile. 506 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1152 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1152 839 MobiDBLite consensus disorder prediction 819 839 - -
Cam11g1152 839 Gene3D Phosphorylase Kinase; domain 1 488 578 - -
Cam11g1152 839 MobiDBLite consensus disorder prediction 313 341 - -
Cam11g1152 839 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 137 - -
Cam11g1152 839 CDD STK_N 11 161 - -
Cam11g1152 839 MobiDBLite consensus disorder prediction 300 341 - -
Cam11g1152 839 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 484 578 - -
Cam11g1152 839 Pfam Universal stress protein family 10 136 IPR006016 -
Cam11g1152 839 FunFam U-box domain-containing protein 51 579 779 - -
Cam11g1152 839 Coils Coil 424 444 - -
Cam11g1152 839 Gene3D Transferase(Phosphotransferase) domain 1 579 784 - -
Cam11g1152 839 SMART serkin_6 506 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1152 839 SUPERFAMILY Protein kinase-like (PK-like) 485 765 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1714 Cam-Chr8:23433888 Cam11g1152 Cam-Chr11:22609819 9.60E-212 dispersed
Cam09g0077 Cam-Chr9:1597981 Cam11g1152 Cam-Chr11:22609819 1.00E-152 dispersed
Cam11g0174 Cam-Chr11:3313877 Cam11g1152 Cam-Chr11:22609819 5.70E-102 dispersed
Cam11g1152 Cam-Chr11:22609819 Cam03g0002 Cam-Chr3:1025178 3.40E-50 dispersed
Cam11g1152 Cam-Chr11:22609819 Cam08g1453 Cam-Chr8:20830452 8.40E-182 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85578 PF00069 Pkinase 5.30E-37 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1152 - - - 0.0