Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1161 ATGGCTTCCAAACCCTTCTTTTCTCTCTTTTCAATGCTTCTTGTTTCTCTTGTTACTAAGTTCATATTCCCCATGTCTCCACTTGCTTTCGGAGTCACAATCTTCATTGTTCCTCTCTTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCCTTGTCCAAGAGATTTGGCTCCATATTCCTCTTAAAACTCGGCTCCAAGAACCTCGTTGTTGTGTCTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAAGGCGTCGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGATATCTTCACTGGAAATGGTCAAGATATGGTGTTTACCGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTTACAAACAAAGTGGTGCACAACTACAGTGACATGTGGGAAGATGAGATGGACTCTGTGGTTCGTGATCTTAAGAGTAACAAGAAGTTTCAATCAGAAGGGATAGTCATTAGAAAGCGTTTGCAATTGATGTTGTACAATATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGACGATCCTTTGTTCATTGAAGCAACCCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAGTACAACTACGGAGATTTCATTCCTTTGCTCAGACCCTTCTTGCGAGGTTACTTGAACAAGTGTAGAGATTTGCAGAGTAGGAGGTTGAACTTTTTCAACAAAAACTATGTTGAGAAAAGAAGGAAGATAATGGCTGCGAATGGAGATAAGCACAAGATAAGTTGCGCCATGGATCATATTATAGACGCTCAATTGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATCGTGGAGAACATCAACGTGGCTGCTATCGAAACGACATTGTGGTCGATGGAATGGGCGATAGCTGAGCTGGTGAATCATCCAGAAATCCAACACAAGATTCGGGAGGAGATTAGTAATGTCCTAAAAGGAAAGGAAGTGACTGAATATAACCTTCATGAACTACCATACTTGCAAGCAACAGTAAAAGAAACACTAAGGTTGCACACTCCAATTCCATTGTTGGTGCCACATATGAACTTGGAAGAGGCAAAGCTCGGAGGGTACACCATTCCAAAGGAATCTAAGGTGGTAGTGAATGCATGGTGGCTGGCTAATAACCCTGAGTGGTGGAAAAATCCAGAGGAGTTCAGGCCAGAGAGGTTCTTTGAAGAAGAAAGTGGAACAGAGGTTGTTGCTGCAGGAAAAGTGGATTATCGATTCTTACCATTTGGAGTTGGAAGAAGGAGTTGCCCTGGAATTGTTTTGGCAATGCCAATCTTGGGACTCATTGTTGCCAAGTTGGTTTCAAAGTTTGAAATGAAACCTCCTAATGGATTGGAGAAGATTGATGTCGCAGAAAAAGGAGGACAATTCAGTCTGCATATCGCCAACCACTCAACGGTTGTTTTTGACCCCATTACTGCTTAA 1581 42.82 MASKPFFSLFSMLLVSLVTKFIFPMSPLAFGVTIFIVPLFTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLSKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSDMWEDEMDSVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQSRRLNFFNKNYVEKRRKIMAANGDKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQHKIREEISNVLKGKEVTEYNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEVVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPNGLEKIDVAEKGGQFSLHIANHSTVVFDPITA 526
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 22761942 22763614 + CaPI482276_11g011610.1 Cam11g1161 140083
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1161 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 FunFam Trans-cinnamate 4-monooxygenase 44 518 - -
Cam11g1161 526 Pfam Cytochrome P450 54 515 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam11g1161 526 Gene3D Cytochrome P450 48 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 35 525 - GO:0004497(PANTHER)
Cam11g1161 526 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1161 526 SUPERFAMILY Cytochrome P450 54 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g1161 Cam-Chr11:22761942 Cam03g0317 Cam-Chr3:4385937 2.10E-61 dispersed
Cam11g1159 Cam-Chr11:22750392 Cam11g1161 Cam-Chr11:22761942 4.50E-298 proximal
Cam11g1161 Cam-Chr11:22761942 Cam11g1164 Cam-Chr11:22778958 1.40E-256 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1161 K00487 - csv:101205537 998.808