Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1164 ATGGGGCATTCTGCAGAAAAGTTTGGTTTCCTTTGCTCAGTCTCTTCACTAGCTTTGGGGTTGATCACCAAGTTCATTTTCCCCAGTTTATTCTTGTCCATTTCCCCAAACATCCTTCCAATCACTCTTTCCATTGCAGTTGTTTTTGCTTTCACCTTCTTTGGCTTATCCAATTTCTCCAAAAATCCTCCAGGTCCTCTCCCTGTTCCCATCTTTGGGAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCTTTGTCACAAAAATACGGTTCTGTCTTCCGACTCAAACTTGGTTACAAGAATCTAGTTGTGGTGTCTGATGCCGAGCTTGCTAACCAAGTCCTCCATGCTCAAGGTGTGGAGTTTGGATCTCGTCCACGAAATGTTGTCTTCGACATTTTCACTGGTAATGGACAAGATATGGTGTTCACCATTTATGGCAACCATTGGCGTAAAATGCGTAGAATTATGACACTGCCGTTTTTTACAAACAAAGTTGTGCATAACTACAGTGGCATGTGGGAAGAAGAAATGGATTTAGTTGTTCATGATCTTATGAATAACCCAAAGGTAAAATCTGAAGGGTTAGTCATAAGAAAGCGTTTACAACTGATGTTGTACAATATCATGTATAGAATGATGTTTGATACTAAATTTGAATCTCAAGATGATCCTTTGTTTATTGAGGCAACTAAATTCAATTCTGAAAGAAGTCGATTGGCACAAAGTTTTGAATACAATTATGGAGATTTCATTCCTCTGCTTAGACCCTTTTTGAGGAGTTACTTGAACAAATGCAAGGATTTGCAAAGCAGGAGGTTGGCATTTTTCAACAATAACTATGTTGAGAAAAGAAGAAAAATTATGGCTGCCAATGGAGACAAGCACAGGATAAGTTGTGCTATGGATCATATTATAGATGCTCAGCTAAAAGGAGAAATTAGTGAAGAGAATGTGATATACATTGTGGAAAATATTAATGTTGCAGCAATAGAGACGACACTTTGGTCGATGGAGTGGGCAATAGCTGAGTTGGTAAACCATCCAACTGTACAACAAAATATCCGAGAGGAAATCTCAACCATCCTAAAAGGAAAGGAAGTCACAGAATCTAACTTACATGAGCTGCCATATCTGCAAGCCACAGTGAAAGAGACATTGAGACTGCACACACCAATACCTTTATTAGTTCCACATATGAACTTGGAAGAAGCCAAGCTTGGAGGCTACACAATTCCAAAAGAGTCTAAGGTGGTGGTAAATGCATGGTGGTTGGCCAATAACCCAGCATGGTGGAAAAATCCAGAGGAATTCAGGCCAGAGAGGTTCCTTCAAGAAGAAAGTAGCACAGAAGCTGTAGCAGGAGGCAAAGTTGACTTCCGATTCTTACCATTTGGTGTTGGAAGGAGAAGTTGCCCTGGAATTGTTTTGGCGCTGCCAATCTTGGGATTGATCATTGCTAAGTTGGTGACAAATTTTGAAATGAAACCTCCAATTGGCATGGAGAAGATTGATGTGAGCGAAAAAGGAGGACAATTCAGTTTACATATTGCCAACCACTCAACTGTGGCATTCAAACCTATAACTGCTTAG 1608 40.3 MGHSAEKFGFLCSVSSLALGLITKFIFPSLFLSISPNILPITLSIAVVFAFTFFGLSNFSKNPPGPLPVPIFGNWLQVGNDLNHRLLASLSQKYGSVFRLKLGYKNLVVVSDAELANQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTIYGNHWRKMRRIMTLPFFTNKVVHNYSGMWEEEMDLVVHDLMNNPKVKSEGLVIRKRLQLMLYNIMYRMMFDTKFESQDDPLFIEATKFNSERSRLAQSFEYNYGDFIPLLRPFLRSYLNKCKDLQSRRLAFFNNNYVEKRRKIMAANGDKHRISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPTVQQNIREEISTILKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPAWWKNPEEFRPERFLQEESSTEAVAGGKVDFRFLPFGVGRRSCPGIVLALPILGLIIAKLVTNFEMKPPIGMEKIDVSEKGGQFSLHIANHSTVAFKPITA 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22778958 22780709 + CaPI482276_11g011640.1 Cam11g1164 140086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1164 535 SUPERFAMILY Cytochrome P450 63 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 Gene3D Cytochrome P450 57 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 FunFam Trans-cinnamate 4-monooxygenase 56 527 - -
Cam11g1164 535 Pfam Cytochrome P450 63 523 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam11g1164 535 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 44 534 - GO:0004497(PANTHER)
Cam11g1164 535 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1164 535 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1967 Cam-Chr2:32787629 Cam11g1164 Cam-Chr11:22778958 8.30E-193 dispersed
Cam03g0006 Cam-Chr3:1077801 Cam11g1164 Cam-Chr11:22778958 7.50E-182 dispersed
Cam11g1159 Cam-Chr11:22750392 Cam11g1164 Cam-Chr11:22778958 1.50E-256 dispersed
Cam11g1164 Cam-Chr11:22778958 Cam10g1610 Cam-Chr10:29893240 2.00E-64 dispersed
Cam11g1161 Cam-Chr11:22761942 Cam11g1164 Cam-Chr11:22778958 1.40E-256 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1164 K00487 - csv:101205775 1016.91