Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1238 ATGATGGGATCTTTAGTGGTGGCGGAATACAATGTGTCCTTTATTGGCTTGAGGACTTTCACCATGGCTGCTGATTCTTCCTTTGATGGTGCTATTTTCGACTCGCCAAAATCTAGTAAGTTGACTATGCAAGAGAAGAGAGAACTTGTATATGAAATTTCAAAGTCACATGGTGCAAGTGAGACACTGCAGTCATGGAGCCGTCAAGACATTCTACAAGTCCTGTGTGCAGAGATGGGGAAAGAAAGAAAATATACAGGCTTGACGAAGCAGAAAATAATAGAGCATCTTTTGAGACTCATATCCGAAAAGAAGTCATCCGTGCCTGACGTTTTGAAAAACCTTGAGCCACAGTCTCCTGCAGGTGGCCATAAAAATACCAAAAGGCAGAGGAAATCTGAGCATCTAGCTCAACTTTCTGTTCCTGCAAATGACTTTCCAACCAGTAGTTCCCATAATGATTTGGGTCATATGGCTTGCTGCAAAAACTTGGCTTGTCGAGCGACTCTGAGTCCCGAAGATGCTTTTTGTAGAAGGTGTTCATGTTGCATCTGTCGTCAGTATGATGATAACAAGGACCCTAGCTTGTGGATAAGTTGCAGTGCGGAGCCTCCATTTCAAGGTGACTCATGCAACATGTCATGTCATCTTGAATGTGCTTTAAAAGATGAAAGATCAGGAATTTCGAAAGCCGGACGAAGCAGGGGAATTGATGGGAGCTTCTACTGTGTTTCTTGTGGGAAATTAAATGATTTGCTTGGGTGCTGCAGAAAACAACTAGTTCATGCAAAAGATACAAGAAGGGTCGACATACTGTGTTATCGTGTTTCTTTGAGTCAAAAGCTTCTCCATGGAACTGAGAAGTATAAAGTGCTTTATCAGATTGTTGATGAGTCTGTGAGGAAGCTTGAAGCTGAAGTGGGACCAATAGCTGGTGTACCGGTAAAGATGGGTAGAGGTATTGTAAACAGGCTTTCGTCTGGACCCGAAGTTCAAAAACTCTGTGCTTCTGCTATTGAGTTACTGGACTCAATGATCTCCAGCAATTCCTTGCACCTTTCGCCTAATCCTGACATTCAAGATGCAAATTTTGTTCCTGCAAACATGGTTAGATTTGAAGATGTTCAGTCAACATCCCTCACTCTAGTTTTGAGTTGTGAAAATGGATCCTCTGAGAACCAGGTCGGCTTCACCTTATGGCATCGTAAGGCAGATGATGCAGATTACCCGGCAGAACCGACATGTATTCTACGACAACCGAAGGCGAGGTGTGCTGTGATGGGACTATCATCTGCTACTAAATATCATTTCAAAATTGTTCAGTTTGAGGGGACAAGGGAGTTGAGGGAGTTTGAAGTGCAGTTCTCAACAATTAGGGAGGTAGAAGAAAACCCAGGCTGTTTAGAAATTGAAAGAAGCCAAAGCCATGCAACCAACTGTAGCGACCTATCTAATCCTTCTTCGGTTGAAGACGAAACTACCGACATTCTTCCCTATGGTGATCGAACCGATAACCTAGGAAAAAACTCCACTGCCTATTCAAAGGGCACCGAAATGCTTTCCTCGGCTATCTTATCAACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAACACCTGCGGGAACAGTTTCTGTGTTGGATGAGGCAAATGCTACAGGAATGGTAGGTTTGATCCCCAGTTCTGTTGCATCAAAGCTCGAGAACAGGCATGGACCAACTGCCCCAAAACTCAACACCGATAATCAGTTAAACGCCCTTGTTCGATCTGGTATGGAGCGCCAGCCATTCGTTGGCTGTTCTTCAGATGGCTTGCCTATTACTCCCTGCAAGCTTGAAGTGCTAAAGGATAGTCTTGGTAGAGGTGAGAGACCGAAATCCGGCTGCAAGGATCTCGACAATAGGACTCGAAAAGGAGGGGAACCCCAAGACGGCGGCACGTCAAAGATGCGAACTGGGGAAAGACAGGACGACAAATGTGCTGAAAATGGTGTTTCAGATCGGGATTTCGAGCATTATGTGAAGGTCATTAGATGGTTAGAATGCGAGGGTCATATTGAAAAAAATTTCAGGCAGAAATTTCTTACTTGGTACAGCTTGAGAGCATCCCAACAAGAAGTGAAGATTGTGAAGGTGTTTGTTGATACCTTTATTGAAGATCCAGCATCTCTTGCAGAACAACTTGTAGATACTTTTTCTGAATGCATTTCGAGCAAAAAACCGACGACTATGCCGCCCGGGTTCTGCATGAAGCTGTGGCACTGA 2268 44.14 MMGSLVVAEYNVSFIGLRTFTMAADSSFDGAIFDSPKSSKLTMQEKRELVYEISKSHGASETLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLISEKKSSVPDVLKNLEPQSPAGGHKNTKRQRKSEHLAQLSVPANDFPTSSSHNDLGHMACCKNLACRATLSPEDAFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDERSGISKAGRSRGIDGSFYCVSCGKLNDLLGCCRKQLVHAKDTRRVDILCYRVSLSQKLLHGTEKYKVLYQIVDESVRKLEAEVGPIAGVPVKMGRGIVNRLSSGPEVQKLCASAIELLDSMISSNSLHLSPNPDIQDANFVPANMVRFEDVQSTSLTLVLSCENGSSENQVGFTLWHRKADDADYPAEPTCILRQPKARCAVMGLSSATKYHFKIVQFEGTRELREFEVQFSTIREVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRTDNLGKNSTAYSKGTEMLSSAILSTDAFNLSDNGEEGTPAGTVSVLDEANATGMVGLIPSSVASKLENRHGPTAPKLNTDNQLNALVRSGMERQPFVGCSSDGLPITPCKLEVLKDSLGRGERPKSGCKDLDNRTRKGGEPQDGGTSKMRTGERQDDKCAENGVSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSECISSKKPTTMPPGFCMKLWH 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24611190 24615468 - CaPI482276_11g012380.1 Cam11g1238 140160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1238 755 PANTHER VIN3-LIKE PROTEIN 2-RELATED 34 755 IPR044514 GO:0010048(InterPro)|GO:0040029(InterPro)
Cam11g1238 755 Pfam PHD - plant homeodomain finger protein 161 281 IPR032881 -
Cam11g1238 755 MobiDBLite consensus disorder prediction 622 663 - -
Cam11g1238 755 MobiDBLite consensus disorder prediction 112 135 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1143 Cam-Chr6:21854023 Cam11g1238 Cam-Chr11:24611190 1.70E-94 dispersed
Cam11g0292 Cam-Chr11:4428959 Cam11g1238 Cam-Chr11:24611190 1.60E-92 dispersed
Cam08g1617 Cam-Chr8:22394492 Cam11g1238 Cam-Chr11:24611190 4.70E-113 transposed
Cam11g1238 Cam-Chr11:24611190 Cam06g1487 Cam-Chr6:26290900 3.80E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1238 - - - 0.0