Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1283 | ATGGTCACAAAGGATTTGTATTCTTTGTACAAAGGAGTTTTCCCTTTGGCCGATTTCCCTTCTCTTTCCTTCCCTCCGCCTTCGACAATCGACACCGTCATCTCCGTTCTTCAGTTCTTCCTCCTCTCAATCTTCTCATCTTCCTCACCTCACCGTTTGCTGCTTTCTTCCCTCACCGTCGATCTCCCTCCACTCCGTCGATCACCCTCACGCCGTTTCTCTAATTCCACTCCATCGATCTCCCTCACGCCGCCTCTCTCATCCACTCCCTCGATTTCCACTGGCACTGTGTCCAAACTCCCAAGGGCCTCAGGCTTAGCTATTCATCAGTGTAAGGATGTTTTTTTGATTCCTTATGATGTGCAAATGGATTTGGGGAAACAGAAGAATTTGATGGATAGCCCTTTGACGCGGAGCTCTACCCCTAATTCCTCACCTATCTCAAATCCTGGTTCAAATGATGAAAGCCCACGTGTTAAATTCCTGTGCAGCTTCTTGGGAAGTATAATGCCTCGCCCCCAAGATGGCAAGCTTCGGTATGTTGGGGGAGAGACGAGGATTGTGAGTGTTCAGAGGGATATTACATATGAGGAGTTAATGATTAAGATGAGGGAACTTTATGATGGGGCTGCAGTGTTGAAGTACCAGCAACCAGATGAGGATCCTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCTGGTGACGGGTTCACTAGGCTGAGGATATTCTTGTTTTCACATCCTGAACAAGATGGTTCTTTGCCCTTTGTGGATGGTGATGAGAGGGATACTGAAAGGCGATATGTAGATGCTCTTAATAATTCAAATGACATGAATGATTTTGTTAGACAACAACAGCTAAATTCCCCTGCAATTAGTGGCATAGATGATATGCACGGGAATGAACATTTTTTGAACCCAATGAATATTGAAGGTAGTCTTCACACTCAGAGGAGTTGTGAGCCCTTGTCACAATATCATCTGCATCAGCTCACAATCCCCCATGTTGGGTCTGGGGGGCAACAACAATCTGTGGCCCAAAGGTATAGTGAAATGGAAGCTCCATGGAGTCCTGCTTTCCTTTCACCGAGGCATCATGGTCCATATGATTCAAGAACGATGGGTGAATATCCATCTTCTCCATTTGCACGATACCGTATGCCATTCCCAGATTTGCCAGATAAATATTTGGAAAGAATGCCTGAAGACTATGTCAGGCAGCAAATGAATCACCAACATATGTATGAACATCAACCACAATATAACGAGAATATTGTATGGCTGCCAAATGGAACAACTAGTGAAGAGTCAGGTTTCCCAGGTAATATATTACATGGACATGGTGTTCTAGATGGGAATAGTTCTTGTGAACACTGTCGGGCAAATTTTCATCGGTATCAAACACACATGGAACAAGCTAATACGATAAATGGACTTCCCCCTGAATACCCTCAGAATAGAGAGGCCTTGATGCAGAAGGCAGACATGAAGTTCCATCATGGTATTTTTCCAAATGAGCAGAATATTAACGATCATCGATCTAGTTATAATGAGACACCGCCCCATGAGAAAGGATGGATTATGCAACAACAGGTGAGTGTGCGAGGGGATGACACTAGAACACATGTTTCTGGGGCTGGACGATTGAATGATCACTACATTGTGGATGGTTCTGGCTCAAATTTTCCTCCTACACAAAGTAATATAACTGATGGCTGCCATGCTTCCACAAATTTTCATGATGAGGGATTTCGTGATCAGGTTGTGCCTAGTGGGCAACATATGTGTGTTCCTCCTCCAGAAGATCGTGGTGTTGGTTATATGCCTTATGGATATGGAGGAGATCCTCATTATCCTCCAATGGCACAAAGGCATATGCCTGGAAATGCCTCTTGGCGAAATGTTCAGAATCCATTACATGTTGCTCCCACTTATGAAGCATCTGTTTTCCTTCAACAAGGGAATGCGAGCATAAATCCAGGATATATCAAAGCCATGCAGGATGGTAGTCCACGAATTCATATCGGTATGGACCACCAAAATCCTTGGCATGAATCCTCACAAAAAATTTTGGGTATTGAGGGTGCAACTGGTTCAGAGCATTTACCTGGACATGTTTTGAAGACTAACTCGATCGCGGTTGGCCATGACAATCAACACTTAACAAGTTTAGAACATATCCAACCACATCTAGATAAGATAAACCTTGTTGCTTCTCCTATGCAGAGGTCAGATTCATCTTCACCATTTATTCATGAAAAAAAAATGGTTGCACCTTTTCATCCTAGCCAAAATCCGCAACCGAGGGCTGTTAGTGTGGTTAATGAAGCTATGATGATGGAAAGAAAAGTTGTGCATGGGGAAGGAAATGGACATATGATTAATGATACGGGGAAAGTTGACATCTCTGAAGCACACATTGTTTCTCATCCCGGGCAAAATAACACTGATGATACATATTCCAAGGTTGCACCCCTTGAATCGTTAAATTCAACTTGCATGAACTCTGCAGTAGAAAATGGTGATGGGCTGAAACCTTCTGCAGAGACTCTTGAAAAGCCTAAACTATCAGTCAGCCGTCTGAGTTTCTTACCTGAGTTGATTGCATCTGTGAAAAGAGCAGCACTAGAAGTATCTGAAGAGGCAATGGTTGAAGAAACCGCTCAAAGGGGTCCTGATTCAATAGGAAAAAAAGAGACAACAAATGAGCAACATTCCTCGAATGCCCATGGGGAACCTGAGTTGGAAACTGAGAGTGACAATCAAAGCTCTGAAATTGAGCCAACAAAAGCTGAAGAGGAAGCCATTTCAAGAGGATTACAAACAATTAAAAATGATGATCTGGAGGAGATTCGGGAACTAGGGTCTGGGACTTATGGTGCTGTTTACCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATCAAAGCTAGCTGTTTTGCTGGACGGCCTTCGGAAAGGGAACGTTTGATTGCAGATTTTTGGAAGGAAGCTTTGATATTAAGTTCTTTACACCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGACGGTCCTGATGGTTCCTTAGCAACAGTGACAGAATTCATGGTTAATGGATCATTGAAGCAGTTTTTGCACAAGAAGGACAGGACCATCGATCGTCGTAAGAGACTCATTATAGCTATGGATGCTGCATTTGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTTGATTTGAAATGCGAAAACCTTTTAGTGAATATGAGAGACCCTCAGAGGCCTGTATGCAAGATTGGTGATTTGGGATTGTCAAAGGTGAGACAACACACGTTAGTGTCAGGAGGGGTTCGTGGAACTTTGCCCTGGATGGCACCGGAGCTTCTTAGTGGGAAAAGTAACATGGTGACAGAGAAGATCGATGTTTACTCATTTGGGATTGTTATGTGGGAACTACTCACAGGAGATGAACCATATTCAGATATGCATTGTGCTTCTATAATTGGAGGAATTGTGAACAATTGTTTACGCCCTGAAATTCCGACATGGTGCGATCCAGAATGGAAGGCTTTAATGTCAAGCTGTTGGGACTCGGACCCAGCTAAGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCTGCAATGAATAGACTGCATTGCTGGGAGACTACAAGTACAGATATGAAGGAGATCCACGTAGGCAATGGGAATGATTTCACTTGGGATTCTGCCGTTGGAAGCGTACGCCATACAGGAAAGGAGCAAGAGACATGTGAGCTCATCAAGTCACTGACTTGGACTTGCAAATTGTTCAAAAGGAAAAAGTGCATGGACATGACTGCAACTGCACGTGTTATAGGATAG | 3912 | 43.28 | MVTKDLYSLYKGVFPLADFPSLSFPPPSTIDTVISVLQFFLLSIFSSSSPHRLLLSSLTVDLPPLRRSPSRRFSNSTPSISLTPPLSSTPSISTGTVSKLPRASGLAIHQCKDVFLIPYDVQMDLGKQKNLMDSPLTRSSTPNSSPISNPGSNDESPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVQRDITYEELMIKMRELYDGAAVLKYQQPDEDPDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSHPEQDGSLPFVDGDERDTERRYVDALNNSNDMNDFVRQQQLNSPAISGIDDMHGNEHFLNPMNIEGSLHTQRSCEPLSQYHLHQLTIPHVGSGGQQQSVAQRYSEMEAPWSPAFLSPRHHGPYDSRTMGEYPSSPFARYRMPFPDLPDKYLERMPEDYVRQQMNHQHMYEHQPQYNENIVWLPNGTTSEESGFPGNILHGHGVLDGNSSCEHCRANFHRYQTHMEQANTINGLPPEYPQNREALMQKADMKFHHGIFPNEQNINDHRSSYNETPPHEKGWIMQQQVSVRGDDTRTHVSGAGRLNDHYIVDGSGSNFPPTQSNITDGCHASTNFHDEGFRDQVVPSGQHMCVPPPEDRGVGYMPYGYGGDPHYPPMAQRHMPGNASWRNVQNPLHVAPTYEASVFLQQGNASINPGYIKAMQDGSPRIHIGMDHQNPWHESSQKILGIEGATGSEHLPGHVLKTNSIAVGHDNQHLTSLEHIQPHLDKINLVASPMQRSDSSSPFIHEKKMVAPFHPSQNPQPRAVSVVNEAMMMERKVVHGEGNGHMINDTGKVDISEAHIVSHPGQNNTDDTYSKVAPLESLNSTCMNSAVENGDGLKPSAETLEKPKLSVSRLSFLPELIASVKRAALEVSEEAMVEETAQRGPDSIGKKETTNEQHSSNAHGEPELETESDNQSSEIEPTKAEEEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGDEPYSDMHCASIIGGIVNNCLRPEIPTWCDPEWKALMSSCWDSDPAKRPSFSEISQKLRNMAAAMNRLHCWETTSTDMKEIHVGNGNDFTWDSAVGSVRHTGKEQETCELIKSLTWTCKLFKRKKCMDMTATARVIG | 1303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25366720 | 25380001 | - | CaPI482276_11g012830.1 | Cam11g1283 | 140205 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1283 | 1303 | Gene3D | Phosphorylase Kinase; domain 1 | 947 | 1047 | - | - | |
Cam11g1283 | 1303 | MobiDBLite | consensus disorder prediction | 69 | 94 | - | - | |
Cam11g1283 | 1303 | MobiDBLite | consensus disorder prediction | 892 | 955 | - | - | |
Cam11g1283 | 1303 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 178 | 260 | - | - | |
Cam11g1283 | 1303 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 954 | 1048 | - | - | |
Cam11g1283 | 1303 | ProSiteProfiles | Protein kinase domain profile. | 961 | 1238 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam11g1283 | 1303 | SUPERFAMILY | CAD & PB1 domains | 175 | 263 | - | - | |
Cam11g1283 | 1303 | MobiDBLite | consensus disorder prediction | 131 | 156 | - | - | |
Cam11g1283 | 1303 | CDD | PB1_UP2 | 162 | 258 | - | - | |
Cam11g1283 | 1303 | Pfam | PB1 domain | 174 | 258 | IPR000270 | GO:0005515(InterPro) | |
Cam11g1283 | 1303 | PRINTS | Tyrosine kinase catalytic domain signature | 1151 | 1173 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1283 | 1303 | PRINTS | Tyrosine kinase catalytic domain signature | 1195 | 1217 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1283 | 1303 | PRINTS | Tyrosine kinase catalytic domain signature | 1043 | 1056 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1283 | 1303 | PRINTS | Tyrosine kinase catalytic domain signature | 1080 | 1098 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1283 | 1303 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 1049 | 1240 | - | - | |
Cam11g1283 | 1303 | SUPERFAMILY | Protein kinase-like (PK-like) | 948 | 1222 | IPR011009 | - | |
Cam11g1283 | 1303 | Pfam | Protein tyrosine and serine/threonine kinase | 963 | 1224 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1283 | 1303 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 137 | 1228 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cam11g1283 | 1303 | ProSitePatterns | Protein kinases ATP-binding region signature. | 967 | 988 | IPR017441 | GO:0005524(InterPro) | |
Cam11g1283 | 1303 | CDD | STKc_MAP3K-like | 967 | 1224 | - | - | |
Cam11g1283 | 1303 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1086 | 1098 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1283 | 1303 | SMART | PB1_new | 173 | 258 | IPR000270 | GO:0005515(InterPro) | |
Cam11g1283 | 1303 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1048 | 1272 | - | - | |
Cam11g1283 | 1303 | MobiDBLite | consensus disorder prediction | 132 | 155 | - | - | |
Cam11g1283 | 1303 | Gene3D | - | 177 | 260 | - | - | |
Cam11g1283 | 1303 | MobiDBLite | consensus disorder prediction | 68 | 94 | - | - | |
Cam11g1283 | 1303 | SMART | serkin_6 | 961 | 1230 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g0402 | Cam-Chr5:3690728 | Cam11g1283 | Cam-Chr11:25366720 | 5.20E-145 | dispersed | |
Cam06g1341 | Cam-Chr6:24828014 | Cam11g1283 | Cam-Chr11:25366720 | 8.50E-140 | dispersed | |
Cam10g0668 | Cam-Chr10:10448346 | Cam11g1283 | Cam-Chr11:25366720 | 8.00E-30 | dispersed | |
Cam11g1283 | Cam-Chr11:25366720 | Cam11g1485 | Cam-Chr11:27592838 | 8.50E-48 | dispersed | |
Cam11g1283 | Cam-Chr11:25366720 | Cam03g0428 | Cam-Chr3:5292833 | 3.50E-142 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85581 | PF07714 | PK_Tyr_Ser-Thr | 1.20E-61 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1283 | - | - | - | 0.0 |