Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1283 ATGGTCACAAAGGATTTGTATTCTTTGTACAAAGGAGTTTTCCCTTTGGCCGATTTCCCTTCTCTTTCCTTCCCTCCGCCTTCGACAATCGACACCGTCATCTCCGTTCTTCAGTTCTTCCTCCTCTCAATCTTCTCATCTTCCTCACCTCACCGTTTGCTGCTTTCTTCCCTCACCGTCGATCTCCCTCCACTCCGTCGATCACCCTCACGCCGTTTCTCTAATTCCACTCCATCGATCTCCCTCACGCCGCCTCTCTCATCCACTCCCTCGATTTCCACTGGCACTGTGTCCAAACTCCCAAGGGCCTCAGGCTTAGCTATTCATCAGTGTAAGGATGTTTTTTTGATTCCTTATGATGTGCAAATGGATTTGGGGAAACAGAAGAATTTGATGGATAGCCCTTTGACGCGGAGCTCTACCCCTAATTCCTCACCTATCTCAAATCCTGGTTCAAATGATGAAAGCCCACGTGTTAAATTCCTGTGCAGCTTCTTGGGAAGTATAATGCCTCGCCCCCAAGATGGCAAGCTTCGGTATGTTGGGGGAGAGACGAGGATTGTGAGTGTTCAGAGGGATATTACATATGAGGAGTTAATGATTAAGATGAGGGAACTTTATGATGGGGCTGCAGTGTTGAAGTACCAGCAACCAGATGAGGATCCTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCTGGTGACGGGTTCACTAGGCTGAGGATATTCTTGTTTTCACATCCTGAACAAGATGGTTCTTTGCCCTTTGTGGATGGTGATGAGAGGGATACTGAAAGGCGATATGTAGATGCTCTTAATAATTCAAATGACATGAATGATTTTGTTAGACAACAACAGCTAAATTCCCCTGCAATTAGTGGCATAGATGATATGCACGGGAATGAACATTTTTTGAACCCAATGAATATTGAAGGTAGTCTTCACACTCAGAGGAGTTGTGAGCCCTTGTCACAATATCATCTGCATCAGCTCACAATCCCCCATGTTGGGTCTGGGGGGCAACAACAATCTGTGGCCCAAAGGTATAGTGAAATGGAAGCTCCATGGAGTCCTGCTTTCCTTTCACCGAGGCATCATGGTCCATATGATTCAAGAACGATGGGTGAATATCCATCTTCTCCATTTGCACGATACCGTATGCCATTCCCAGATTTGCCAGATAAATATTTGGAAAGAATGCCTGAAGACTATGTCAGGCAGCAAATGAATCACCAACATATGTATGAACATCAACCACAATATAACGAGAATATTGTATGGCTGCCAAATGGAACAACTAGTGAAGAGTCAGGTTTCCCAGGTAATATATTACATGGACATGGTGTTCTAGATGGGAATAGTTCTTGTGAACACTGTCGGGCAAATTTTCATCGGTATCAAACACACATGGAACAAGCTAATACGATAAATGGACTTCCCCCTGAATACCCTCAGAATAGAGAGGCCTTGATGCAGAAGGCAGACATGAAGTTCCATCATGGTATTTTTCCAAATGAGCAGAATATTAACGATCATCGATCTAGTTATAATGAGACACCGCCCCATGAGAAAGGATGGATTATGCAACAACAGGTGAGTGTGCGAGGGGATGACACTAGAACACATGTTTCTGGGGCTGGACGATTGAATGATCACTACATTGTGGATGGTTCTGGCTCAAATTTTCCTCCTACACAAAGTAATATAACTGATGGCTGCCATGCTTCCACAAATTTTCATGATGAGGGATTTCGTGATCAGGTTGTGCCTAGTGGGCAACATATGTGTGTTCCTCCTCCAGAAGATCGTGGTGTTGGTTATATGCCTTATGGATATGGAGGAGATCCTCATTATCCTCCAATGGCACAAAGGCATATGCCTGGAAATGCCTCTTGGCGAAATGTTCAGAATCCATTACATGTTGCTCCCACTTATGAAGCATCTGTTTTCCTTCAACAAGGGAATGCGAGCATAAATCCAGGATATATCAAAGCCATGCAGGATGGTAGTCCACGAATTCATATCGGTATGGACCACCAAAATCCTTGGCATGAATCCTCACAAAAAATTTTGGGTATTGAGGGTGCAACTGGTTCAGAGCATTTACCTGGACATGTTTTGAAGACTAACTCGATCGCGGTTGGCCATGACAATCAACACTTAACAAGTTTAGAACATATCCAACCACATCTAGATAAGATAAACCTTGTTGCTTCTCCTATGCAGAGGTCAGATTCATCTTCACCATTTATTCATGAAAAAAAAATGGTTGCACCTTTTCATCCTAGCCAAAATCCGCAACCGAGGGCTGTTAGTGTGGTTAATGAAGCTATGATGATGGAAAGAAAAGTTGTGCATGGGGAAGGAAATGGACATATGATTAATGATACGGGGAAAGTTGACATCTCTGAAGCACACATTGTTTCTCATCCCGGGCAAAATAACACTGATGATACATATTCCAAGGTTGCACCCCTTGAATCGTTAAATTCAACTTGCATGAACTCTGCAGTAGAAAATGGTGATGGGCTGAAACCTTCTGCAGAGACTCTTGAAAAGCCTAAACTATCAGTCAGCCGTCTGAGTTTCTTACCTGAGTTGATTGCATCTGTGAAAAGAGCAGCACTAGAAGTATCTGAAGAGGCAATGGTTGAAGAAACCGCTCAAAGGGGTCCTGATTCAATAGGAAAAAAAGAGACAACAAATGAGCAACATTCCTCGAATGCCCATGGGGAACCTGAGTTGGAAACTGAGAGTGACAATCAAAGCTCTGAAATTGAGCCAACAAAAGCTGAAGAGGAAGCCATTTCAAGAGGATTACAAACAATTAAAAATGATGATCTGGAGGAGATTCGGGAACTAGGGTCTGGGACTTATGGTGCTGTTTACCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATCAAAGCTAGCTGTTTTGCTGGACGGCCTTCGGAAAGGGAACGTTTGATTGCAGATTTTTGGAAGGAAGCTTTGATATTAAGTTCTTTACACCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGACGGTCCTGATGGTTCCTTAGCAACAGTGACAGAATTCATGGTTAATGGATCATTGAAGCAGTTTTTGCACAAGAAGGACAGGACCATCGATCGTCGTAAGAGACTCATTATAGCTATGGATGCTGCATTTGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTTGATTTGAAATGCGAAAACCTTTTAGTGAATATGAGAGACCCTCAGAGGCCTGTATGCAAGATTGGTGATTTGGGATTGTCAAAGGTGAGACAACACACGTTAGTGTCAGGAGGGGTTCGTGGAACTTTGCCCTGGATGGCACCGGAGCTTCTTAGTGGGAAAAGTAACATGGTGACAGAGAAGATCGATGTTTACTCATTTGGGATTGTTATGTGGGAACTACTCACAGGAGATGAACCATATTCAGATATGCATTGTGCTTCTATAATTGGAGGAATTGTGAACAATTGTTTACGCCCTGAAATTCCGACATGGTGCGATCCAGAATGGAAGGCTTTAATGTCAAGCTGTTGGGACTCGGACCCAGCTAAGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCTGCAATGAATAGACTGCATTGCTGGGAGACTACAAGTACAGATATGAAGGAGATCCACGTAGGCAATGGGAATGATTTCACTTGGGATTCTGCCGTTGGAAGCGTACGCCATACAGGAAAGGAGCAAGAGACATGTGAGCTCATCAAGTCACTGACTTGGACTTGCAAATTGTTCAAAAGGAAAAAGTGCATGGACATGACTGCAACTGCACGTGTTATAGGATAG 3912 43.28 MVTKDLYSLYKGVFPLADFPSLSFPPPSTIDTVISVLQFFLLSIFSSSSPHRLLLSSLTVDLPPLRRSPSRRFSNSTPSISLTPPLSSTPSISTGTVSKLPRASGLAIHQCKDVFLIPYDVQMDLGKQKNLMDSPLTRSSTPNSSPISNPGSNDESPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVQRDITYEELMIKMRELYDGAAVLKYQQPDEDPDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSHPEQDGSLPFVDGDERDTERRYVDALNNSNDMNDFVRQQQLNSPAISGIDDMHGNEHFLNPMNIEGSLHTQRSCEPLSQYHLHQLTIPHVGSGGQQQSVAQRYSEMEAPWSPAFLSPRHHGPYDSRTMGEYPSSPFARYRMPFPDLPDKYLERMPEDYVRQQMNHQHMYEHQPQYNENIVWLPNGTTSEESGFPGNILHGHGVLDGNSSCEHCRANFHRYQTHMEQANTINGLPPEYPQNREALMQKADMKFHHGIFPNEQNINDHRSSYNETPPHEKGWIMQQQVSVRGDDTRTHVSGAGRLNDHYIVDGSGSNFPPTQSNITDGCHASTNFHDEGFRDQVVPSGQHMCVPPPEDRGVGYMPYGYGGDPHYPPMAQRHMPGNASWRNVQNPLHVAPTYEASVFLQQGNASINPGYIKAMQDGSPRIHIGMDHQNPWHESSQKILGIEGATGSEHLPGHVLKTNSIAVGHDNQHLTSLEHIQPHLDKINLVASPMQRSDSSSPFIHEKKMVAPFHPSQNPQPRAVSVVNEAMMMERKVVHGEGNGHMINDTGKVDISEAHIVSHPGQNNTDDTYSKVAPLESLNSTCMNSAVENGDGLKPSAETLEKPKLSVSRLSFLPELIASVKRAALEVSEEAMVEETAQRGPDSIGKKETTNEQHSSNAHGEPELETESDNQSSEIEPTKAEEEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGDEPYSDMHCASIIGGIVNNCLRPEIPTWCDPEWKALMSSCWDSDPAKRPSFSEISQKLRNMAAAMNRLHCWETTSTDMKEIHVGNGNDFTWDSAVGSVRHTGKEQETCELIKSLTWTCKLFKRKKCMDMTATARVIG 1303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25366720 25380001 - CaPI482276_11g012830.1 Cam11g1283 140205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1283 1303 Gene3D Phosphorylase Kinase; domain 1 947 1047 - -
Cam11g1283 1303 MobiDBLite consensus disorder prediction 69 94 - -
Cam11g1283 1303 MobiDBLite consensus disorder prediction 892 955 - -
Cam11g1283 1303 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 178 260 - -
Cam11g1283 1303 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 954 1048 - -
Cam11g1283 1303 ProSiteProfiles Protein kinase domain profile. 961 1238 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1283 1303 SUPERFAMILY CAD & PB1 domains 175 263 - -
Cam11g1283 1303 MobiDBLite consensus disorder prediction 131 156 - -
Cam11g1283 1303 CDD PB1_UP2 162 258 - -
Cam11g1283 1303 Pfam PB1 domain 174 258 IPR000270 GO:0005515(InterPro)
Cam11g1283 1303 PRINTS Tyrosine kinase catalytic domain signature 1151 1173 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1283 1303 PRINTS Tyrosine kinase catalytic domain signature 1195 1217 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1283 1303 PRINTS Tyrosine kinase catalytic domain signature 1043 1056 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1283 1303 PRINTS Tyrosine kinase catalytic domain signature 1080 1098 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1283 1303 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1049 1240 - -
Cam11g1283 1303 SUPERFAMILY Protein kinase-like (PK-like) 948 1222 IPR011009 -
Cam11g1283 1303 Pfam Protein tyrosine and serine/threonine kinase 963 1224 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1283 1303 PANTHER SERINE-THREONINE PROTEIN KINASE 137 1228 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cam11g1283 1303 ProSitePatterns Protein kinases ATP-binding region signature. 967 988 IPR017441 GO:0005524(InterPro)
Cam11g1283 1303 CDD STKc_MAP3K-like 967 1224 - -
Cam11g1283 1303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1086 1098 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1283 1303 SMART PB1_new 173 258 IPR000270 GO:0005515(InterPro)
Cam11g1283 1303 Gene3D Transferase(Phosphotransferase) domain 1 1048 1272 - -
Cam11g1283 1303 MobiDBLite consensus disorder prediction 132 155 - -
Cam11g1283 1303 Gene3D - 177 260 - -
Cam11g1283 1303 MobiDBLite consensus disorder prediction 68 94 - -
Cam11g1283 1303 SMART serkin_6 961 1230 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0402 Cam-Chr5:3690728 Cam11g1283 Cam-Chr11:25366720 5.20E-145 dispersed
Cam06g1341 Cam-Chr6:24828014 Cam11g1283 Cam-Chr11:25366720 8.50E-140 dispersed
Cam10g0668 Cam-Chr10:10448346 Cam11g1283 Cam-Chr11:25366720 8.00E-30 dispersed
Cam11g1283 Cam-Chr11:25366720 Cam11g1485 Cam-Chr11:27592838 8.50E-48 dispersed
Cam11g1283 Cam-Chr11:25366720 Cam03g0428 Cam-Chr3:5292833 3.50E-142 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85581 PF07714 PK_Tyr_Ser-Thr 1.20E-61 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1283 - - - 0.0