Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1297 ATGGGTTTTATTGAAGAATACTTGCCAGCAATGGCTATGTTTGGGCTTCAAGTGACTTATGCCATAATGGCTCTTATCTCCCGGGCTGCCCTTTTGAAGGGCATGAGTCCTAGAGTTTTTGTTGTTTATAGGCAAGCCATTGCCACTCTCTTTATTGCACCCATTGCTTATTTCTCCAGGTCGAAATCTAGGAGGGTGTCTTTGAACTTGAAGAGCTTTTCTCTAATCTTCCTTGCTTCTCTCGTCGGTGTGACGATGAACCAAAATGTTTACTTTGAGGGAGTTTTTTTAGTTAGCTCGTCAATGGCAACGGCAATGACTAATTTGATTCCTGCAGTGACGTTTGTTATAGCAACGATAGTCGGCATGGAGAATTTAAGGTTGGGAAGCTTGAGGAGCATCGCAAAGATTGGAGGGACAGTGGTTTGTGTGAGTGGGGCCATGTGTATGGCTCTTCTAAGGGGTCCAAAGCTTCTCAATACAACACAAGGTTTCGTGGTGAAATCTACATTATTTAGTGTGGAAAGTGGAAGTCACCATGCTTGGTTATTGGGTTCCTTGTGTCTCTTTGGGAGTTGTTGTTGCTGGTCAATTTGGTTGATTTTGCAGGTACCAGCTTCAGCAAGCTATCCCGACAACTTATCTTTATCAGCATGGATGTGTTTCTTTGCCACAATTCAATCGATCATTGTTACTCTATTGGTAGAGCCAATCAATCTACAAACTTGGAAAATACATTCAACCATTGAACTTATTTGTTATCTCTTCTCAGGCATTGTTGGGTCAGGGGTTGCCTTCTTTGTTCAAGCTTGGTGTGTTTCAAAAAGAGGCCCTGTCTTCTCAGCAATGTTCAACCCTCTTTGCACCATTGTTACAACTATTTTGGCAGCTATAGTTCTTCATGAGGAAATTTTTACTGGAAGCTTGTTGGGGGGTGTGGCTGTAATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCAAAAGATTATGTGAAGGAAGAAGGCAAAGAAAAGCAAAGTGTTGAAAAAGAAGAAGAGAATTGTGAATCAGCTGAGAGAATTAGCAATTGTCAAATTGATTTGGAGGAACCACTTTTGTCTAAAGAATCATGA 1113 41.15 MGFIEEYLPAMAMFGLQVTYAIMALISRAALLKGMSPRVFVVYRQAIATLFIAPIAYFSRSKSRRVSLNLKSFSLIFLASLVGVTMNQNVYFEGVFLVSSSMATAMTNLIPAVTFVIATIVGMENLRLGSLRSIAKIGGTVVCVSGAMCMALLRGPKLLNTTQGFVVKSTLFSVESGSHHAWLLGSLCLFGSCCCWSIWLILQVPASASYPDNLSLSAWMCFFATIQSIIVTLLVEPINLQTWKIHSTIELICYLFSGIVGSGVAFFVQAWCVSKRGPVFSAMFNPLCTIVTTILAAIVLHEEIFTGSLLGGVAVIIGLYIVLWGKAKDYVKEEGKEKQSVEKEEENCESAERISNCQIDLEEPLLSKES 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25663545 25668589 - CaPI482276_11g012970.1 Cam11g1297 140219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1297 370 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam11g1297 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 327 - -
Cam11g1297 370 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020(InterPro)
Cam11g1297 370 Pfam EamA-like transporter family 12 142 IPR000620 GO:0016020(InterPro)
Cam11g1297 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1420 Cam-Chr6:25615675 Cam11g1297 Cam-Chr11:25663545 2.20E-89 dispersed
Cam11g1297 Cam-Chr11:25663545 Cam11g1590 Cam-Chr11:28644389 1.80E-56 dispersed
Cam11g1297 Cam-Chr11:25663545 Cam06g1419 Cam-Chr6:25608956 5.50E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1297 - - - 0.0