Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1347 ATGGGAAAGCTTAGCTTGAACTGCTGTAATAGCTTCCTTGAGAATTCAAAACCTTATTTTGCCATGATATCCTTACAATTTGGATATGCTGGCATGAACATCATCTCTAAAGTCTCTCTTAGTAGAGGGATGAGTCATTACGTCCTCGTCGTTTATCGACATGCTTTCGCTACCGCTTCCATTGCTCCCTTCGTTCTCTTCTTCGAACGGAGAGGACAGCCAAGGATAACACTCAAAGTTTTCATTCAAATATTTGTGTTGGCTTTGCTTGGCCCGGTTATCGATCAAAATTTCTACTATGCTGGGCTAAAATATACTTCACCAACTTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTGATGGCTGTGATCTTTAGGATGGAAAAATTGGAGATGAAGAAATTGAGATGCCAAGCAAAAGTTTTGGGAACTTTAGTGTCAGTGGCTGGAGCAATGTTGATGACTTTATACAAAGGTCCACTTCTTCAAATGGCTTGGTCTAAAAATTCCCATATCACCAATTCTAATGAAACTTCCAACAACAAAGATTGGTTCAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTTTTGCAGAATGAGGCATTGAAGACATACAAGAACCATCAACTCACTCTCACCACACTCGTGTGTTTTCTTGGGACTTTGCAAGCCATAGCTGTGACTTTAGTAGCCGAGCACAAAGCTTCTGTTTGGACAATTGGTTGGGACATGAATCTTCTTGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATACTATGTACAAGGGTTGGTGATGAAAAAGAGAGGACCTGTATTTACAACTGCATTTAGTCCTTTGATTATGATACTTGTGGCCATCATGGGCTCTCTCATCCTTGCTGAAAAGATTTTTCTTGGAGGAATAATAGGATCCATCTTGATAGTGTTTGGGCTATATTCAGTACTTTGGGGAAAGCACAAAGAGAATTTGGAGATGATTAAAACTGCTGCTGTTGATGATGAAATACCAAAAGCAATTAAAGCTTCTTCTCAACCAAATATTAATATTAATAATAATAATATTGCAAACAATGTTGAAGCTAATGAGAATGTGACCATGGCACCCAACAAGCTAAGTTCCAATAATAATTCAATTTTCATTTCCATGCCTGCCCTTGAAAACCCCATTAAACCCAACCAAATCCCAAGAGAATAA 1236 39.32 MGKLSLNCCNSFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERRGQPRITLKVFIQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLEMKKLRCQAKVLGTLVSVAGAMLMTLYKGPLLQMAWSKNSHITNSNETSNNKDWFKGSIFLIIATLAWASLFVLQNEALKTYKNHQLTLTTLVCFLGTLQAIAVTLVAEHKASVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFTTAFSPLIMILVAIMGSLILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLEMIKTAAVDDEIPKAIKASSQPNININNNNIANNVEANENVTMAPNKLSSNNNSIFISMPALENPIKPNQIPRE 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26181227 26185244 - CaPI482276_11g013470.1 Cam11g1347 140269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1347 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Cam11g1347 411 PANTHER WAT1-RELATED PROTEIN 20 350 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam11g1347 411 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020(InterPro)
Cam11g1347 411 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020(InterPro)
Cam11g1347 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0584 Cam-Chr4:19635777 Cam11g1347 Cam-Chr11:26181227 4.70E-120 dispersed
Cam06g0699 Cam-Chr6:9373384 Cam11g1347 Cam-Chr11:26181227 3.70E-70 dispersed
Cam07g0993 Cam-Chr7:24187641 Cam11g1347 Cam-Chr11:26181227 1.00E-49 dispersed
Cam10g1233 Cam-Chr10:25737891 Cam11g1347 Cam-Chr11:26181227 8.70E-43 dispersed
Cam10g1234 Cam-Chr10:25757074 Cam11g1347 Cam-Chr11:26181227 3.20E-37 dispersed
Cam11g1347 Cam-Chr11:26181227 Cam11g1590 Cam-Chr11:28644389 4.70E-93 dispersed
Cam11g1347 Cam-Chr11:26181227 Cam10g1612 Cam-Chr10:29909522 7.60E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1347 - - - 0.0