Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1373 ATGGAACTTACAGATATGCAGCAAAGCAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAACTCCACCATCAAAACCAAAACCAAAAACGTGGTTCTTCTCAATCACAATCTCAATCTCCATCACCATCTCCATCTCCATCTCCTCAGCAGCACCTTCATGGAGTTCCTTTCGATGGCAGATCACCAATTTCGGCGGCAGCACCAACAGGAGGAGGAGGAGGAGGAGGAGCTCCACCTTTCATGGCTTCCATCTCCTCTCTTGTCTCCCTCCCTCCTCCTTCTTCTTCCAATTCTTCTGTTTCCTCCGCCTCTAACGCCGCCGCCCCTCCTCCCCACCTCGACGCTTCACTCGTCATCGCCACCCGATCCGACACCACCACCACCACCACCGATCCTTCTCCCCGATCTGCTTCCAACAATAACGCTCTCAAGCGTTCCACCAAAGATCGCCACACTAAAGTCGACGGTCGTGGCCGTCGTATACGTATGCCGGCCACTTGTGCCGCTAGGGTTTTCCAGTTGACTCGTGAATTAGGCCATAAGTCAGATGGCGAAACCATCGAGTGGCTTCTCCAGCAAGCCGAACCTGCCATCATCGCCGCTACTGGCACCGGTACAATCCCTGCTAATTTCTCCTCCTTAAATATCTCAATTCGTAGCAGTGGATCCACTCTCTCTGCTCCTCCCTCCAAATCCGCTCCCCATTCCTTTCATGGCGCTCTGGCTCTCGCTCACCATCCCCACGCCTATGATGAAGGCTTCGCACATGCTGCTCTGTTAGGGTTTCACCAGCACCAGCAACAGCAACAACAGCAACAGCAACACCAACTCAATTTAATGACCGCCGATCAAATCGGCGACACTCTCCCGACCGGCGGCGGCGGAGGAGATTCAACCGATAACTATATGAGAAAACGATTTAGAGAAGACCTGTTTAAAGAAGATACACAATCTCCAGGAGAGAGCAGTGGCGGCGCTGGATCTCCGAAAGCAATGAAGAGCGATCTGCAATTAGAGAAACAACAACCACCATCAGCTTCTTCGTCGGGGCTACTGCGGCCTGGGGCGGCGATGTGGGCGGTGGCGGCTCCAGGTCCGAGCAGTGGAGCGAGTAACACGTTTTGGATGTTGCCGGTGACGACAGGTTCAGGCGGAGGAAATGTAGGGAGTTCTTCTGGCGGCGGCGGCGGCGTTGGGGGAATGGAAGCTCATCAGATGTGGCCATTTTCGACAAGTGGAAACACATTACAGGCGCCGTTGCATTTGATGCCAAGATTCAACATCCCGGAAATTCAAGCGGCGGCGGCAGCAGCAGGAGGACGAGGCGGCGGGCAATTGCAACTGGGTTCGATGTTGATGCAACAAGGTGGCGGAGGAGGCGGTGGTTTGGGAGTAACGGAATCGAATTTGGGAATGTTGGCTGCTCTTAATGCTGCTTACTCTAGAGGCGGTGGTTTCAATATTAATTCTGATCATAATCATCCATTGGAGAATCATCCTCACACTCATACTACTGATAGTGGAGATGAAGCTCCAAACACTTCACAATGA 1557 53.18 MELTDMQQSNKQQQQQQQQQHQLHHQNQNQKRGSSQSQSQSPSPSPSPSPQQHLHGVPFDGRSPISAAAPTGGGGGGGAPPFMASISSLVSLPPPSSSNSSVSSASNAAAPPPHLDASLVIATRSDTTTTTTDPSPRSASNNNALKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSSLNISIRSSGSTLSAPPSKSAPHSFHGALALAHHPHAYDEGFAHAALLGFHQHQQQQQQQQQHQLNLMTADQIGDTLPTGGGGGDSTDNYMRKRFREDLFKEDTQSPGESSGGAGSPKAMKSDLQLEKQQPPSASSSGLLRPGAAMWAVAAPGPSSGASNTFWMLPVTTGSGGGNVGSSSGGGGGVGGMEAHQMWPFSTSGNTLQAPLHLMPRFNIPEIQAAAAAAGGRGGGQLQLGSMLMQQGGGGGGGLGVTESNLGMLAALNAAYSRGGGFNINSDHNHPLENHPHTHTTDSGDEAPNTSQ 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26425977 26427533 - CaPI482276_11g013730.1 Cam11g1373 140295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1373 518 MobiDBLite consensus disorder prediction 1 42 - -
Cam11g1373 518 MobiDBLite consensus disorder prediction 126 161 - -
Cam11g1373 518 MobiDBLite consensus disorder prediction 126 145 - -
Cam11g1373 518 MobiDBLite consensus disorder prediction 1 113 - -
Cam11g1373 518 MobiDBLite consensus disorder prediction 146 161 - -
Cam11g1373 518 MobiDBLite consensus disorder prediction 89 108 - -
Cam11g1373 518 Pfam TCP family transcription factor 148 278 IPR017887 -
Cam11g1373 518 MobiDBLite consensus disorder prediction 490 518 - -
Cam11g1373 518 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 100 482 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cam11g1373 518 MobiDBLite consensus disorder prediction 313 353 - -
Cam11g1373 518 ProSiteProfiles TCP domain profile. 149 203 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1469 Cam-Chr2:27644121 Cam11g1373 Cam-Chr11:26425977 3.90E-29 dispersed
Cam04g1275 Cam-Chr4:26628138 Cam11g1373 Cam-Chr11:26425977 4.40E-34 dispersed
Cam06g1770 Cam-Chr6:28886272 Cam11g1373 Cam-Chr11:26425977 2.00E-37 dispersed
Cam11g1373 Cam-Chr11:26425977 Cam05g2637 Cam-Chr5:33849672 9.20E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52920 PF03634 TCP 2.00E-39 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1373 - - - 0.0