Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1395 | ATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCGGCTGTGGCAATCTCTTCATCCAGTTCCCAGAAAAATGGGTGCCCCAAGGCTTCTAATTTCCTTACCGGCAAGAAGCTGAGGCTGAGAAACTTAACTTCCGCGGCTGCTGTTGCTCCTCGATCAGCTCCGGTATGCGCCGCAGCTGACCCCGACAGACCTCTCTGGTTCCCTGGCAGCACCCCTCCTCCATGGCTCGACGGCAGCCTTCCCGGCGACTTTGGCTTTGACCCACTTGGTCTTGCGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAGGCGGAGCTGGTACACTGCCGATGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTTTTGACAAAGATCGGAATATTGAACACTCCGTCGTGGTACACCGCCGGTGAATTGGAATACTTCACCGACACCACCACTCTGTTCATAGTGGAACTCATTTTCATTGGTTGGGCCGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTAACAACAAGCTCACCGGAACCGACGTCGGATACCCGGGTGGGCTTTGGTTCGACCCGCTCGGGTGGGGAAGCGGATCACCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATAAAGAACGGGCGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTCTTCGCTCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCTTTCACACCAAAGTGA | 807 | 56.38 | MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK | 268 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 26609014 | 26611337 | - | CaPI482276_11g013950.1 | Cam11g1395 | 140317 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1395 | 268 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 73 | 258 | - | - | |
Cam11g1395 | 268 | SUPERFAMILY | Chlorophyll a-b binding protein | 59 | 266 | - | - | |
Cam11g1395 | 268 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 12 | 263 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Cam11g1395 | 268 | Gene3D | Chlorophyll a/b binding protein domain | 73 | 258 | - | - | |
Cam11g1395 | 268 | Pfam | Chlorophyll A-B binding protein | 72 | 238 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g1513 | Cam-Chr3:30119407 | Cam11g1395 | Cam-Chr11:26609014 | 5.00E-88 | dispersed | |
Cam04g1248 | Cam-Chr4:26466273 | Cam11g1395 | Cam-Chr11:26609014 | 1.70E-61 | dispersed | |
Cam08g2067 | Cam-Chr8:26202949 | Cam11g1395 | Cam-Chr11:26609014 | 4.10E-50 | dispersed | |
Cam09g2098 | Cam-Chr9:35536908 | Cam11g1395 | Cam-Chr11:26609014 | 6.30E-37 | dispersed | |
Cam10g2163 | Cam-Chr10:35128765 | Cam11g1395 | Cam-Chr11:26609014 | 9.90E-28 | dispersed | |
Cam11g1395 | Cam-Chr11:26609014 | Cam11g1928 | Cam-Chr11:31668378 | 1.60E-22 | dispersed | |
Cam11g1395 | Cam-Chr11:26609014 | Cam06g1755 | Cam-Chr6:28793862 | 1.20E-62 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1395 | K08908 | - | csv:101214055 | 518.079 |