Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1399 ATGAAGCTCCTTATTCTGGCCACCCTCACCATCTCACTCCTCTTCCCTCTCACCCTCCTCAATTTCCTCATCTTTTGCTCTCTCCTCGTCCTCTCTCTCAACTTCTGGCTCATCCCCGGTGGATTTGCGTGGCGTAACCACCACCGCTTTTCCGTCAACCTCCCTGGCCCCTCCGGTTGGCCGCTCCTTGGCACGCTCCCCCAAATGGGGGCGCTTGCTCACCAGAATCTTGCCGCCATTGCTCACTCCTTCAAAGCCACACGCCTTATGTCCTTTAGCTTGGGTGCCACTCGAGCCATCATAAGCAGCCACCCTGACACGGCCAAGCAGATTCTCTGCGGGTCTGCTTTCTCCGACCGTCCAGTCAAGCAATCAGCTCGGCTCATGATGTTCGAGAGAGCCATTGGCTTTGCTCCAAATGGGGACTATTGGCGCAATCTTCGACGAATTGCCGCGAACCACATGTTTTCCCCACGGAGAATCTCCGATTTGGAGGGGCTCCGTAGGGAGGTGGCGGATGAAATGGTGGCAGCGGTGTCAGAAAATATGGCGGTGGATGGGGTGGTGAAGCTGAGAGAGGTGCTGCAGAAGCATTCTTTGAAGAACATAATAGAGAGTGTGTTTGGGAGTGGTTTGGAGATGGGGAGGAAGGAAGAGCTGAGTGATATGGTGAGAGAAGGATATGAATTGATAGCGATGTTCAATTGGGAAGATTATTTTCCGGTCAGCTTTTTGGATTTTGGTGGAGTGAAACGGAGGTGCAATGAATTGGCGGGCAGGGTTAATGTGGTAATTGGCCAGATTGTTGAAGAGAGAAAAAGAGAAAATAATAAGTTTAATAATGATTTTCTTACTACTTTGCTAACTTTGCCAAAGGAGGATCAGTTGAGTGATTCAGATACGGTGGCTGTTTTGTGGGAAATGATATTTCGTGGAACCGACACTATAGCAATACTTCTAGAATGGATAATGGCCAGGATGATATTACACCCAGATATCCAAGCCAAAGCTCAAAAGGAGATTGACACGTGCGTAGGGTGTAATAGGCACGTGCGTGATTCCGACATTCCGAACCTTCCTTACCTCCAGGCAATAGTTAAAGAAGTGCTTCGTCTACACCCACCAGGGCCATTACTTTCGTGGGCCCGTTTGGCAATCCACGATGTCCACGTGGACAAGATCTTAATCCCAGCTGGCACAACGGCAATGGTGAACATGTGGGCCATAGCCCACGACCCTTCCATATGGAAAGACCCATGGACATTTAAGCCGGAACGGTTCATTGAAAACGACATGTCGATTATGGGATCGGACTTGAGATTGGCACCGTTCGGAGCTGGGCGAAGGGCGTGCCCAGGAAGGGCCTTGGGTTTAGCCACTGTGCACCTATGGCTAGCCACTTTTCTGCAACGGTTCAGATGGGTTCCATGTTCTACAAAGTCGGTTAGTTTATCGGAGTGTTTGAAGCTATCCCTTGAAATGAAGAAGCCTCTGAATTGTCGTGTGGTTAGTCGATGA 1518 50.0 MKLLILATLTISLLFPLTLLNFLIFCSLLVLSLNFWLIPGGFAWRNHHRFSVNLPGPSGWPLLGTLPQMGALAHQNLAAIAHSFKATRLMSFSLGATRAIISSHPDTAKQILCGSAFSDRPVKQSARLMMFERAIGFAPNGDYWRNLRRIAANHMFSPRRISDLEGLRREVADEMVAAVSENMAVDGVVKLREVLQKHSLKNIIESVFGSGLEMGRKEELSDMVREGYELIAMFNWEDYFPVSFLDFGGVKRRCNELAGRVNVVIGQIVEERKRENNKFNNDFLTTLLTLPKEDQLSDSDTVAVLWEMIFRGTDTIAILLEWIMARMILHPDIQAKAQKEIDTCVGCNRHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKILIPAGTTAMVNMWAIAHDPSIWKDPWTFKPERFIENDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLATFLQRFRWVPCSTKSVSLSECLKLSLEMKKPLNCRVVSR 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 26648301 26650939 - CaPI482276_11g013990.1 Cam11g1399 140321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1399 505 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 Pfam Cytochrome P450 55 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PANTHER CYTOCHROME P450 78A7-RELATED 16 502 IPR051996 -
Cam11g1399 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam11g1399 505 FunFam Cytochrome P450 78A5 46 505 - -
Cam11g1399 505 SUPERFAMILY Cytochrome P450 55 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 Gene3D Cytochrome P450 44 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1399 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1198 Cam-Chr4:26066783 Cam11g1399 Cam-Chr11:26648301 2.00E-152 dispersed
Cam06g0286 Cam-Chr6:4884092 Cam11g1399 Cam-Chr11:26648301 2.60E-128 dispersed
Cam11g1399 Cam-Chr11:26648301 Cam10g1610 Cam-Chr10:29893240 8.10E-63 dispersed
Cam11g1399 Cam-Chr11:26648301 Cam08g1500 Cam-Chr8:21210568 4.60E-159 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1399 - - - 0.0