Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1401 ATGGCCGACGATTCCCCCGAGAAGAACATCCTCCAGAGCACCGCTCTTCTCCAGTATATTCTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTTGACAAGTCCATGAGTGTGATGAATGTACCGGTGGATGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACTACTGCGCTTGCATTGCCCGCCGATGGCCAGATAACAGCAATTGATGTGGATAGACAACCATTCGAATTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCATAAGATTAATTTTGTGGAATCCCAAGCATTGGTTGCCCTCAATGACCTCCTCAATGATGACAAAGAAGAAGAATTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTACATTAAATATCACGAGTTGCTTCTAAAATTGGTGAAGGTAGGTGGCATAATTGCCTATGATAACACTTTGTGGTTTGGATCAGTGGCACTAAACGATGACGATGTCCATGAAGATTTGAAGGAGAACAAAAGTCATATACAACGACTCAATGCTTTTCTAGTAAATGACATGCGGGTAGAGATAGCTCTCCTCTCCATTGGAGACGGCGTCACTCTTTGCAGGCGTATCAAATAA 708 42.51 MADDSPEKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSVMNVPVDEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVDRQPFEFGLPFIRKAGVDHKINFVESQALVALNDLLNDDKEEEFDFAFVDAKKSEYIKYHELLLKLVKVGGIIAYDNTLWFGSVALNDDDVHEDLKENKSHIQRLNAFLVNDMRVEIALLSIGDGVTLCRRIK 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 26674594 26678064 - CaPI482276_11g014010.1 Cam11g1401 140323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1401 235 CDD AdoMet_MTases 74 177 - -
Cam11g1401 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
Cam11g1401 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 234 IPR050362 GO:0008757(PANTHER)
Cam11g1401 235 Pfam O-methyltransferase 25 234 IPR002935 GO:0008171(InterPro)
Cam11g1401 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Cam11g1401 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g1401 Cam-Chr11:26674594 Cam11g1404 Cam-Chr11:26702716 5.30E-110 dispersed
Cam11g1401 Cam-Chr11:26674594 Cam11g1402 Cam-Chr11:26683043 2.20E-119 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1401 K00588 - csv:101212121 389.423