Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1402 ATGGCCGACGATTCCCCCAAGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTCGATAAGTCCATGAGTTTGATGAATGTACCAGCGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCGCTCCTCACCACTGCGCTTGCACTGCCCGCCGATGGCCAGATAACCGCAATTGATGTGAATAGACAATCGTTCGAATTTGGTTTGCCATTTATAAAAAAAGCGGGAGTTGATCATAAGATCAATTTTGTGGAATCTCAGGCATTGGTTGCCTTGAATGACCTCCTCAATGATGGCAAAGAAGAAGATTTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTATATTAGATATCATGAGTTGCTTCTAAAACTAGTGAAGGTAGGTGGAGTAATTGTCTATGATAACACTCTATGGTTTGGATCAGTGGCGCTAAGCGATGACGTCGTCCATGAAAAATTGAAGGAGAACAAAAGTCATATACAACAATTCAATGCTTTTCTAGTAAATGACATGCGGGTGGAGATAGCTCTCCTCACCATTGGAGATGGTGTCACTCTTTGCAGACGTATCAAATAA 708 41.81 MADDSPKKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSLMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRQSFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEDFDFAFVDAKKSEYIRYHELLLKLVKVGGVIVYDNTLWFGSVALSDDVVHEKLKENKSHIQQFNAFLVNDMRVEIALLTIGDGVTLCRRIK 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26683043 26687931 - CaPI482276_11g014020.1 Cam11g1402 140324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1402 235 CDD AdoMet_MTases 74 177 - -
Cam11g1402 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
Cam11g1402 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 234 IPR050362 GO:0008757(PANTHER)
Cam11g1402 235 Pfam O-methyltransferase 25 234 IPR002935 GO:0008171(InterPro)
Cam11g1402 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Cam11g1402 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0629 Cam-Chr2:7257239 Cam11g1402 Cam-Chr11:26683043 1.20E-64 dispersed
Cam07g1079 Cam-Chr7:25256153 Cam11g1402 Cam-Chr11:26683043 1.00E-36 dispersed
Cam11g1402 Cam-Chr11:26683043 Cam11g1404 Cam-Chr11:26702716 2.80E-111 dispersed
Cam11g1401 Cam-Chr11:26674594 Cam11g1402 Cam-Chr11:26683043 2.20E-119 tandem
Cam11g1402 Cam-Chr11:26683043 Cam11g1403 Cam-Chr11:26692255 4.50E-109 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1402 K00588 - csv:101212121 379.793