Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1404 ATGGCGGACAATTACCCCTTGAAAAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTCGAAGCCAACGCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCAACCATTAAGAAATTTGAAATCGCGAGTATGATGAATGTACCGGTAGATGAAGGATTATTTCTATTAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCTCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATCAAAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATGCCAAGGATTGGTTGTCCTCAATGACCTCCTCAATGATGGTAAAGAAGAAGAGTTTGATTTTGCATTTGTCGATGCCAATAAATCAGAGTACATTAAATATCATGAGTTCCTTCTAAAATTGGTGAAGATAGGTGGAGTAATTGCCTATGATAACACTCTATGGTTCGGATCAGTGGCGCTAAGTGATGACGCCGTCCATGAAAATTTGAAGGAGAACAAAAGTTATTTGCAACGATTCAATGCTTTTCTAGTCAATGACACACGGGTGGAGATAGTTCTCCTCTCCATTGGAGATGGTATCACTCTTTGCAGGCGTATCAAATAA 705 40.85 MADNYPLKNILQSTALLQYILEANAYPREHEQLKELRESTIKKFEIASMMNVPVDEGLFLLMLLKLMNAKKTIEIGVFTGYSLLTTALALPSDGQITAIDVDRESFEFGLPFIKKAGVDHKINFVECQGLVVLNDLLNDGKEEEFDFAFVDANKSEYIKYHEFLLKLVKIGGVIAYDNTLWFGSVALSDDAVHENLKENKSYLQRFNAFLVNDTRVEIVLLSIGDGITLCRRIK 234
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 26702716 26707114 - CaPI482276_11g014040.1 Cam11g1404 140326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1404 234 Gene3D Vaccinia Virus protein VP39 2 234 IPR029063 -
Cam11g1404 234 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 233 IPR002935 GO:0008171(InterPro)
Cam11g1404 234 CDD AdoMet_MTases 73 176 - -
Cam11g1404 234 PANTHER O-METHYLTRANSFERASE-RELATED 8 233 IPR050362 GO:0008757(PANTHER)
Cam11g1404 234 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 232 IPR029063 -
Cam11g1404 234 Pfam O-methyltransferase 25 233 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g1401 Cam-Chr11:26674594 Cam11g1404 Cam-Chr11:26702716 5.30E-110 dispersed
Cam11g1402 Cam-Chr11:26683043 Cam11g1404 Cam-Chr11:26702716 2.80E-111 dispersed
Cam11g1403 Cam-Chr11:26692255 Cam11g1404 Cam-Chr11:26702716 9.60E-108 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1404 K00588 - csv:101212121 361.303