Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam11g1404 | ATGGCGGACAATTACCCCTTGAAAAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTCGAAGCCAACGCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCAACCATTAAGAAATTTGAAATCGCGAGTATGATGAATGTACCGGTAGATGAAGGATTATTTCTATTAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCTCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATCAAAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATGCCAAGGATTGGTTGTCCTCAATGACCTCCTCAATGATGGTAAAGAAGAAGAGTTTGATTTTGCATTTGTCGATGCCAATAAATCAGAGTACATTAAATATCATGAGTTCCTTCTAAAATTGGTGAAGATAGGTGGAGTAATTGCCTATGATAACACTCTATGGTTCGGATCAGTGGCGCTAAGTGATGACGCCGTCCATGAAAATTTGAAGGAGAACAAAAGTTATTTGCAACGATTCAATGCTTTTCTAGTCAATGACACACGGGTGGAGATAGTTCTCCTCTCCATTGGAGATGGTATCACTCTTTGCAGGCGTATCAAATAA | 705 | 40.85 | MADNYPLKNILQSTALLQYILEANAYPREHEQLKELRESTIKKFEIASMMNVPVDEGLFLLMLLKLMNAKKTIEIGVFTGYSLLTTALALPSDGQITAIDVDRESFEFGLPFIKKAGVDHKINFVECQGLVVLNDLLNDGKEEEFDFAFVDANKSEYIKYHEFLLKLVKIGGVIAYDNTLWFGSVALSDDAVHENLKENKSYLQRFNAFLVNDTRVEIVLLSIGDGITLCRRIK | 234 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 26702716 | 26707114 | - | CaPI482276_11g014040.1 | Cam11g1404 | 140326 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam11g1404 | 234 | Gene3D | Vaccinia Virus protein VP39 | 2 | 234 | IPR029063 | - | |
| Cam11g1404 | 234 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 9 | 233 | IPR002935 | GO:0008171(InterPro) | |
| Cam11g1404 | 234 | CDD | AdoMet_MTases | 73 | 176 | - | - | |
| Cam11g1404 | 234 | PANTHER | O-METHYLTRANSFERASE-RELATED | 8 | 233 | IPR050362 | GO:0008757(PANTHER) | |
| Cam11g1404 | 234 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 16 | 232 | IPR029063 | - | |
| Cam11g1404 | 234 | Pfam | O-methyltransferase | 25 | 233 | IPR002935 | GO:0008171(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam11g1401 | Cam-Chr11:26674594 | Cam11g1404 | Cam-Chr11:26702716 | 5.30E-110 | dispersed | |
| Cam11g1402 | Cam-Chr11:26683043 | Cam11g1404 | Cam-Chr11:26702716 | 2.80E-111 | dispersed | |
| Cam11g1403 | Cam-Chr11:26692255 | Cam11g1404 | Cam-Chr11:26702716 | 9.60E-108 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam11g1404 | K00588 | - | csv:101212121 | 361.303 |