Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1410 ATGGACAAAAATCTGTTGTTTCTAGTCTTGATTTTTCACTTCCAGGTTGCGTTTAGGGTTTTAGCCCTCTCGCCGGATGGTCTCTCGCTTCTCTCTCTGAAGTCGGCGATTGACCAGTCGCCGGATTCCTCTGTTTTCTCCGATTGGAACGAGGATGACTCCACGCCTTGCCGATGGTCTGGCATTTCTTGCATGAACGTTTCCGGTGACTCGCGAGTCGTTGGAATTGCTCTCTCTGGTAAGAATCTCCATGGCTACATTCCTTCTGAACTCGGCTCGCTTGTCTATCTCCGGCGATTGAACCTCCATAACAATAATCTCTACGGCTCGATACCTGAACAGTTGTTTAATGCTACCTCATTACATAGCCTATTTCTCTACAGTAATAATCTCTCTGGTCCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAAAACCTCGATCTCTCCAACAATTCTCTCGCCGGACCACTACCCGACGAATTGAAGAATTGTAAACAATTGCAGCGATTAATACTCGCTAGAAATCAATTTGACGGAGAAATACCGTCTGGTGTTTGGTCTGGGATGGATAATTTACTTCAACTCGATCTCTCATCCAACGATTTCAGCGGATCGATTCCGGAGGATCTAGGGCAACTGAAGACACTTTCCGGTACGCTCAACCTCTCCTTCAATCATTTATCAGGTAAAATCCCGAAAACTCTCGGAGATTTGCCGGTAACGGTGAGTTTCGACCTCCGGAGCAACAATTTAAGCGGAAGCATACCTCAGACAGGTTCTTTCGCGAATCAAGGACCGACTGCATTTCTCAACAATCCCGAGTTATGTGGATTTCCTCTTCAAAAATCTTGTGAGAGTTCAGAACGTGGCTCACCGGGAAATCCGGATTCCAAGCCATCTTACATTTCCCCTAGAAAAGGATTGAGCGCCGGATTAATCATTCTCATCTCTGCCGCTGACGCCGCCGGAGTAGCATTTATCGGCTTGGTAATAGTATACATATATTGGCGACGGAAGGACAATTCGAACGGCTGTAGCTGTACGGCGAAAAGAAAATTCGGTGGGAATCAGAAAGACAATCTCTGCAATTTTCCTTGTATGAATGGACATGATAAGAATGAGGAGTCGGAAATGGAGGAACCGGAGAACAGTGAGAGAAGCAGAGAAGAAGGAGGGCTGGTGGCCGTAGACAAAGGCTTTACGTTCGAACTCGACGAGTTGCTGAGAGCGTCGGCGTATGTGCTGGGAAAGAGTGGACTGGGAATTGTGTACAAGGTGGTCCTCGGAAATGGGATTCCGGTGGCTGTACGGCGGTTGGGGGAAGGCGGAGAACAGAGGTATAAGGAGTTTGCGGCGGAGGTGCAGGCGATTGGAAGGGTAAAGCATCCTAATATTGTGAAACTGAGAGCTTATTATTGGGCGCCGGATGAGAAGCTTCTGATCAGTGATTTTATCTCCAATGGGAACTTGGCCTCTGCTCTTCGCGGGAAGAACGGGCAGGCATCTTCAATCCTTTCATGGGCAACAAGATTACGAGTAGCCAAGGGAACCGCCAGAGGATTAGCCTATCTACACGAATGCAGCCCAAGAAAATTCGTCCATGGCGACATCAAGCCCTCCAACATTCTCCTCGACAACGATTTCCATCCCCACATCTCCGACTTCGGCCTCAACCGCTTGATCAGCATCACCGGCAACAACCCCTCCTCCTCAGGCGGCCTCATCGGCGGCGCCTTCTCCTACCTCAAGTCCGTCCAAACCGACCGCACCAACAACTACTGCGCCCCGGAGGCCCGAGCCCCCGGCGGCCGCCCCACCCAAAAATGGGACGTTTATTCCTTCGGCGTCATGGTCCTCGAATTACTCACCGGAAAGTCGCCGGAGCTTTCCCCGAACACGTCGACTTCTTTGGAGATTCCGGATTTGGTGAGATGGGTTAGAAAAGGGTTTGAAGAAGCAAAGCCATTGTCGGAATTGGTGGACCCTGCTCTGTTACAAGAAGTACATGCTAAGAAAGAAGTGCTGGCCGTATTCCACTTGGCGCTCGCTTGTACAGAGAGCGACCCGGAAATTCGGCCCAGAATGAAGACGGTGTCGGAGAATTTCGAGAGGATTGGATCGTGA 2130 49.95 MDKNLLFLVLIFHFQVAFRVLALSPDGLSLLSLKSAIDQSPDSSVFSDWNEDDSTPCRWSGISCMNVSGDSRVVGIALSGKNLHGYIPSELGSLVYLRRLNLHNNNLYGSIPEQLFNATSLHSLFLYSNNLSGPFPPSICNIPRLQNLDLSNNSLAGPLPDELKNCKQLQRLILARNQFDGEIPSGVWSGMDNLLQLDLSSNDFSGSIPEDLGQLKTLSGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPELCGFPLQKSCESSERGSPGNPDSKPSYISPRKGLSAGLIILISAADAAGVAFIGLVIVYIYWRRKDNSNGCSCTAKRKFGGNQKDNLCNFPCMNGHDKNEESEMEEPENSERSREEGGLVAVDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGKNGQASSILSWATRLRVAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFHPHISDFGLNRLISITGNNPSSSGGLIGGAFSYLKSVQTDRTNNYCAPEARAPGGRPTQKWDVYSFGVMVLELLTGKSPELSPNTSTSLEIPDLVRWVRKGFEEAKPLSELVDPALLQEVHAKKEVLAVFHLALACTESDPEIRPRMKTVSENFERIGS 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26771885 26776757 - CaPI482276_11g014100.1 Cam11g1410 140332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1410 709 MobiDBLite consensus disorder prediction 285 304 - -
Cam11g1410 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 167 707 IPR046959 -
Cam11g1410 709 FunFam Leucine-rich repeat receptor-like protein kinase 193 288 - -
Cam11g1410 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1410 709 SUPERFAMILY L domain-like 28 283 - -
Cam11g1410 709 CDD STKc_IRAK 417 707 - -
Cam11g1410 709 SMART serkin_6 415 707 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1410 709 SUPERFAMILY Protein kinase-like (PK-like) 416 702 IPR011009 -
Cam11g1410 709 Gene3D Phosphorylase Kinase; domain 1 403 486 - -
Cam11g1410 709 Pfam Leucine Rich Repeat 193 215 IPR001611 GO:0005515(InterPro)
Cam11g1410 709 Pfam Leucine Rich Repeat 221 240 IPR001611 GO:0005515(InterPro)
Cam11g1410 709 MobiDBLite consensus disorder prediction 286 300 - -
Cam11g1410 709 Pfam Protein kinase domain 416 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1410 709 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 189 - -
Cam11g1410 709 ProSiteProfiles Protein kinase domain profile. 411 707 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1410 709 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Cam11g1410 709 Gene3D Transferase(Phosphotransferase) domain 1 487 709 - -
Cam11g1410 709 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Cam11g1410 709 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Cam11g1410 709 FunFam Leucine-rich repeat receptor-like protein kinase 394 486 - -
Cam11g1410 709 FunFam Os07g0541700 protein 492 574 - -
Cam11g1410 709 Pfam Leucine rich repeat 97 155 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0053 Cam-Chr4:1557467 Cam11g1410 Cam-Chr11:26771885 6.60E-94 dispersed
Cam05g1190 Cam-Chr5:11186074 Cam11g1410 Cam-Chr11:26771885 3.30E-60 dispersed
Cam11g0283 Cam-Chr11:4305745 Cam11g1410 Cam-Chr11:26771885 2.50E-48 dispersed
Cam11g0771 Cam-Chr11:9634437 Cam11g1410 Cam-Chr11:26771885 9.40E-90 dispersed
Cam11g1410 Cam-Chr11:26771885 Cam01g1487 Cam-Chr1:28427222 1.10E-46 dispersed
Cam11g1410 Cam-Chr11:26771885 Cam05g2445 Cam-Chr5:32390926 2.50E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85586 PF00069 Pkinase 6.90E-33 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1410 - - - 0.0