Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1437 | ATGGATAAGCTCTGCTGTTTTAATGCTTCATACTCTGGGATTAGGTCCGCATTGAATTACGGTAAAGGAAGAAGCCATGAGGGTATAATCAAGTATGGGTTCTGCCTGGTCAAAGGGAAAGCTAATCATCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAAGAACATGAATTGGGGCTCTTTGCTATTTATGATGGCCATTTAGGAGAAAGTGTGCCTGCCTACTTACAAAAGCATTTGTTTTCTAACATCTTGAAAGAGGAAGAGTTTTGGGTTGACCCCAACAGCTCCATCTCAAAAGCATATGAAAAGACGGACCAGGCGATTCTATCCCACAGCTCTGACTTGGGTCGTGGTGGATCAACTGCTGTTACTGCTATTCTGATTAATGGTCGAAGACTATGGGTGGCCAATGTCGGTGATTCACGTGCAGTTCTTTCTAGAGGGGGCGAAGCTGTACAGATGACCATCGATCATGAGCCAAATACAGAACGTCGCACCATTGAGAATAAAGGTGGCTTCGTTTCAAACATGCCAGGAGACGTGCCACGAGTAAACGGCCAGCTAGCAGTTTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACCTGCGATCAGATCCTGACATACGTGATGTTAATGTAGACGCCAACACGGACATATTAATTCTCGCCAGCGACGGTCTTTGGAAGGTCATGGCCAATCAAGAAGCGGTCGATATTGCACGAAGAATTAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGGAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTTGGACCGGTCAAACGTCGACTTTGTGACGAGCTTGGATCGAGCATGGGCTGGACTTGGACCGACCTCTGGGCTTCAATTGATGAGGTTGAATATATGGATCATGCTGAACAATTTATGA | 957 | 44.72 | MDKLCCFNASYSGIRSALNYGKGRSHEGIIKYGFCLVKGKANHPMEDYHVAKFVQIQEHELGLFAIYDGHLGESVPAYLQKHLFSNILKEEEFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGRRLWVANVGDSRAVLSRGGEAVQMTIDHEPNTERRTIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDVNVDANTDILILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALEKESKDDISCIVVRFRLDRSNVDFVTSLDRAWAGLGPTSGLQLMRLNIWIMLNNL | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27092904 | 27096946 | + | CaPI482276_11g014370.1 | Cam11g1437 | 140359 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1437 | 318 | Gene3D | - | 26 | 286 | IPR036457 | - | |
Cam11g1437 | 318 | ProSiteProfiles | PPM-type phosphatase domain profile. | 31 | 278 | IPR001932 | - | |
Cam11g1437 | 318 | PANTHER | PROTEIN PHOSPHATASE | 29 | 277 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cam11g1437 | 318 | FunFam | Probable protein phosphatase 2C 39 | 21 | 279 | - | - | |
Cam11g1437 | 318 | CDD | PP2Cc | 30 | 278 | IPR001932 | - | |
Cam11g1437 | 318 | SMART | PP2C_4 | 23 | 276 | IPR001932 | - | |
Cam11g1437 | 318 | Pfam | Protein phosphatase 2C | 40 | 271 | IPR001932 | - | |
Cam11g1437 | 318 | SMART | PP2C_SIG_2 | 42 | 278 | IPR001932 | - | |
Cam11g1437 | 318 | SUPERFAMILY | PP2C-like | 25 | 278 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g1043 | Cam-Chr5:9434930 | Cam11g1437 | Cam-Chr11:27092904 | 4.00E-53 | dispersed | |
Cam09g0478 | Cam-Chr9:4938292 | Cam11g1437 | Cam-Chr11:27092904 | 2.10E-34 | dispersed | |
Cam10g0905 | Cam-Chr10:20267856 | Cam11g1437 | Cam-Chr11:27092904 | 2.80E-121 | dispersed | |
Cam11g0846 | Cam-Chr11:11170124 | Cam11g1437 | Cam-Chr11:27092904 | 5.50E-30 | dispersed | |
Cam11g1437 | Cam-Chr11:27092904 | Cam11g1818 | Cam-Chr11:30703321 | 3.50E-88 | dispersed | |
Cam11g1437 | Cam-Chr11:27092904 | Cam07g0248 | Cam-Chr7:3602918 | 5.40E-89 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1437 | K17506 | - | csv:101213414 | 553.132 |