Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1440 ATGGCGAAAGAGAGAGAACTACTCGTTTACTCAGCTAGATTGGCAGAGCAGGCTGAGAGATACGAAGAGATGGTTGAGAAAATGGAGAAAGTTGCAAAGTTAAACGTGGAATTGACTGTGGAAGAGAGAAATCTGCTATCTGTTGGTTATAAGAATGTAATAGGAGCTAGACGAGCTTCCTGGCGTATTTTATCTTCAATTGAACAGAAGGAAACTACCAAACATAATGAGAAGAATGTGGAACGGATAATTGATTACAGGCATCGGGTTGAAGACGAGCTCTCTAAAATATGCAGTGACATATTGTCGATCATTGACCAACATCTCCTTCCATGTTCCTCAGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGACTATTGTCGGTATTTGGCTGAGTTTAAATCTGGTGACGAGCGTAAACAAGTTGCAGATCAATCATTAAAGTCTTATGAGGCTGCATCTGCAATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCGCTGAACTTCTCTGTTTTCTACTATGAGATATTGAATTCCCCTGAAAGGGCCTGCCACCTTGCCAAGCAGGCCTTTGATGAGGCTATTGCAGAACTTGACAGTCTCAGTGAAGAATCCTACAAGGACAGTACCCTTATTATGCAACTCCTTAGGGACAACCTGACCCTGTGGACTTCTGATCTTCCAGACGAAGGTGGAGAGCAGTCCAATGCTGATGAACTTTAG 750 42.53 MAKERELLVYSARLAEQAERYEEMVEKMEKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKETTKHNEKNVERIIDYRHRVEDELSKICSDILSIIDQHLLPCSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKSYEAASAIANSDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSNADEL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27102452 27105272 - CaPI482276_11g014400.1 Cam11g1440 140362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1440 249 FunFam 14-3-3 protein epsilon 1 246 - -
Cam11g1440 249 Gene3D - 1 246 IPR036815 -
Cam11g1440 249 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cam11g1440 249 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Cam11g1440 249 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Cam11g1440 249 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Cam11g1440 249 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cam11g1440 249 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Cam11g1440 249 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cam11g1440 249 Coils Coil 11 34 - -
Cam11g1440 249 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Cam11g1440 249 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Cam11g1440 249 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cam11g1440 249 SMART 1433_4 5 246 IPR023410 -
Cam11g1440 249 Pfam 14-3-3 protein 12 233 IPR023410 -
Cam11g1440 249 PIRSF 14-3-3 1 246 IPR000308 -
Cam11g1440 249 Coils Coil 193 213 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g1440 Cam-Chr11:27102452 Cam11g1470 Cam-Chr11:27424338 4.50E-83 dispersed
Cam11g1440 Cam-Chr11:27102452 Cam11g1448 Cam-Chr11:27210148 6.50E-90 proximal
Cam11g1440 Cam-Chr11:27102452 Cam08g1563 Cam-Chr8:21859106 1.50E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1440 K06630 - csv:101213169 449.514