Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1440 | ATGGCGAAAGAGAGAGAACTACTCGTTTACTCAGCTAGATTGGCAGAGCAGGCTGAGAGATACGAAGAGATGGTTGAGAAAATGGAGAAAGTTGCAAAGTTAAACGTGGAATTGACTGTGGAAGAGAGAAATCTGCTATCTGTTGGTTATAAGAATGTAATAGGAGCTAGACGAGCTTCCTGGCGTATTTTATCTTCAATTGAACAGAAGGAAACTACCAAACATAATGAGAAGAATGTGGAACGGATAATTGATTACAGGCATCGGGTTGAAGACGAGCTCTCTAAAATATGCAGTGACATATTGTCGATCATTGACCAACATCTCCTTCCATGTTCCTCAGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGACTATTGTCGGTATTTGGCTGAGTTTAAATCTGGTGACGAGCGTAAACAAGTTGCAGATCAATCATTAAAGTCTTATGAGGCTGCATCTGCAATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCGCTGAACTTCTCTGTTTTCTACTATGAGATATTGAATTCCCCTGAAAGGGCCTGCCACCTTGCCAAGCAGGCCTTTGATGAGGCTATTGCAGAACTTGACAGTCTCAGTGAAGAATCCTACAAGGACAGTACCCTTATTATGCAACTCCTTAGGGACAACCTGACCCTGTGGACTTCTGATCTTCCAGACGAAGGTGGAGAGCAGTCCAATGCTGATGAACTTTAG | 750 | 42.53 | MAKERELLVYSARLAEQAERYEEMVEKMEKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKETTKHNEKNVERIIDYRHRVEDELSKICSDILSIIDQHLLPCSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKSYEAASAIANSDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSNADEL | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27102452 | 27105272 | - | CaPI482276_11g014400.1 | Cam11g1440 | 140362 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1440 | 249 | FunFam | 14-3-3 protein epsilon | 1 | 246 | - | - | |
Cam11g1440 | 249 | Gene3D | - | 1 | 246 | IPR036815 | - | |
Cam11g1440 | 249 | PRINTS | 14-3-3 protein zeta signature | 86 | 110 | IPR000308 | - | |
Cam11g1440 | 249 | PRINTS | 14-3-3 protein zeta signature | 117 | 139 | IPR000308 | - | |
Cam11g1440 | 249 | PRINTS | 14-3-3 protein zeta signature | 179 | 205 | IPR000308 | - | |
Cam11g1440 | 249 | PRINTS | 14-3-3 protein zeta signature | 152 | 178 | IPR000308 | - | |
Cam11g1440 | 249 | PRINTS | 14-3-3 protein zeta signature | 37 | 66 | IPR000308 | - | |
Cam11g1440 | 249 | PRINTS | 14-3-3 protein zeta signature | 206 | 235 | IPR000308 | - | |
Cam11g1440 | 249 | PANTHER | 14-3-3 PROTEIN | 4 | 238 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
Cam11g1440 | 249 | Coils | Coil | 11 | 34 | - | - | |
Cam11g1440 | 249 | SUPERFAMILY | 14-3-3 protein | 4 | 235 | IPR036815 | - | |
Cam11g1440 | 249 | ProSitePatterns | 14-3-3 proteins signature 2. | 215 | 234 | IPR023409 | - | |
Cam11g1440 | 249 | ProSitePatterns | 14-3-3 proteins signature 1. | 43 | 53 | IPR023409 | - | |
Cam11g1440 | 249 | SMART | 1433_4 | 5 | 246 | IPR023410 | - | |
Cam11g1440 | 249 | Pfam | 14-3-3 protein | 12 | 233 | IPR023410 | - | |
Cam11g1440 | 249 | PIRSF | 14-3-3 | 1 | 246 | IPR000308 | - | |
Cam11g1440 | 249 | Coils | Coil | 193 | 213 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam11g1440 | Cam-Chr11:27102452 | Cam11g1470 | Cam-Chr11:27424338 | 4.50E-83 | dispersed | |
Cam11g1440 | Cam-Chr11:27102452 | Cam11g1448 | Cam-Chr11:27210148 | 6.50E-90 | proximal | |
Cam11g1440 | Cam-Chr11:27102452 | Cam08g1563 | Cam-Chr8:21859106 | 1.50E-110 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1440 | K06630 | - | csv:101213169 | 449.514 |