Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1448 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCCAAGCTTGCCGAGCAAGCTGAGCGCTATGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCGCCGCTACAGACAACGAGGAGCTCACCGTCGAGGAGCGGAACCTTCTCTCTGTTGCTTACAAGAATGTTATTGGAGCGCGTAGAGCCTCCTGGAGGATTATTTCCTCCATTGAACAGAAGGAGGAGAGCCGAGGGAATGATGATCATGTCTCCGTTATCCGAGAATACAGATCCAAGATCGAGACTGAGCTCTCCAACATCTGTGATGGGATCCTTAAGCTTCTTGACTCCCGTCTCATTTCCTCTGCTGCTTCTGGTGACTCCAAGGTGTTTTATCTCAAGATGAAGGGAGATTATCATAGATACCTTGCTGAATTCAAGACCGGAGCCGAGCGGAAGGAAGCTGCCGAAAGTACTCTCACTGCTTATAAATCTGCACAGGATATTGCAAATGCTGAACTTGCTCCTACTCACCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGTGCTTGCAGCCTTGCTAAACAGGCATTCGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACTCTATGGACTTCGGACATGCAGGATGATGGAGATGAGATTAAAGAAGCAGCTCCCAAACGCGACGATGAATAG 777 48.39 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAATDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIREYRSKIETELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27210148 27212137 + CaPI482276_11g014480.1 Cam11g1448 140370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1448 258 PIRSF 14-3-3 2 250 IPR000308 -
Cam11g1448 258 SMART 1433_4 8 250 IPR023410 -
Cam11g1448 258 FunFam 14-3-3 protein epsilon 4 251 - -
Cam11g1448 258 Coils Coil 14 34 - -
Cam11g1448 258 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cam11g1448 258 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cam11g1448 258 Pfam 14-3-3 protein 14 238 IPR023410 -
Cam11g1448 258 Gene3D - 1 252 IPR036815 -
Cam11g1448 258 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cam11g1448 258 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cam11g1448 258 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cam11g1448 258 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cam11g1448 258 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cam11g1448 258 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cam11g1448 258 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cam11g1448 258 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1646 Cam-Chr7:31040438 Cam11g1448 Cam-Chr11:27210148 2.90E-117 dispersed
Cam08g1643 Cam-Chr8:22633405 Cam11g1448 Cam-Chr11:27210148 1.40E-100 dispersed
Cam11g1448 Cam-Chr11:27210148 Cam11g1470 Cam-Chr11:27424338 2.90E-101 dispersed
Cam11g1440 Cam-Chr11:27102452 Cam11g1448 Cam-Chr11:27210148 6.50E-90 proximal
Cam11g1448 Cam-Chr11:27210148 Cam08g1580 Cam-Chr8:21977294 3.90E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1448 K06630 - csv:101210822 494.967