Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1470 ATGGCGTCCGCCATCCCTGAAAACCTAACAAGGGAGCAGTATGTTTACCTTTCGAAGCTTTCCGAGCAAGCCGAGCGCTACGAGGAAATGGTTCAGTTCATGCAGAAGCTTGTACTGAGCTCCACTCCAGCCTCGGAGCTCACTGTCGAGGAGCGCAATCTCCTTTCCGTCGCATACAAAAATGTGATCGGTTCTCTCCGCGCGGCTTGGCGTATCGTATCCTCAATTGAACAGAAGGAAGAAGGAAGGAAGAACGAAGATCACGTTGTCCTTGTCAAGGATTACAGATCCAAGGTCGAGTCCGAGCTCACCGACGTCTGCGCCAGTATTTTGAAGCTGTTGGACTCCAATCTGATACCATCCTCATCCTCTGGTGAATCTAAGGTGTTCTACTTAAAGATGAAGGGAGATTACCATAGGTACCTGGCGGAGTTTAAGATCGGGGAGGAGAGGAAGTCCGCCGCCGAGGATACCATGCTAGCTTACAAGGCTGCTCAGGATATTGCAGCTGCCGATCTTGCACCAACGCATCCAATCAGGCTGGGCCTAGCACTAAATTTCTCTGTTTTTTACTTCGAGATCCTGAACCAGCCTGACAAAGCCTGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATTGCGGAATTGGACACATTAGGTGAAGAATCATACAAGGATAGCACTCTAATCATGCAGCTCTTAAGAGACAATCTCACCCTTTGGACTTCTGATACACAGATTATCGGTCGGAGTTTGATTCCTTCTAGGGTTTCTCTGAGTTCTCTCTCGTCTCATGGAGGACTTCGCCTTTCACGATCGCAACGTCTGCGGTTTGCTCGAGAGCAGGCACATCAACTTTCGTCAAGATCCTACCTATGGTTTGCAGATGCACTCGTCATTCATCCAAAGACTCTCCCAGGAAAAGGAACTGGAGTGGCCTGGAATTCTAGTGGTTCGCTTTTGATATCTGGATCAGATGACACCCGGATAAACATCTGGAGCTATTCTGGTCGAAAACTATTGCACTCTGTGGATACTGGGCATTCTGCAAACATATTTTGTACAAAATTTGTTCCTGAAACGTCTGATGAGCTTGTGGTCTCAGGAGCTGGGGATGCAGAGGTGCGCTTGTTTAATTTATCTCGCTTACGTGGGAGAGGACAAGATGATAATCCCATATCTTCATCGGCTTTGTATCAGTGTCACACCAGAAGAGTAAAAAAATTAGCTGTTGAAATAGGGAATCCAAATGTAGTATGGAGTGCTAGTGAGGATGGGACTCTTAGACAGCATGATTTTCGAGAGGGCATGTCTTGTCCTCCTGACGGAGCTTCTCACCAAGAATGCCACAATGTTCTTCTTGATTTGCGGTGTGGAGCTAAGAGGTCATTGGCTGATCCTCCCAGACAAACCCTTGCTTTGAAATCCTGTGACGTTAGTTCCACTAGGCCTCATTTACTTCTGGTTGGTGGAAGTGATGCATTTGCACGGTTATATGATAGAAGGATGCTGCCGCCCTTGTCTTCCAGCCAGAAGAGGATGTCACCACCTCCCTGTGTTAACTACTTCTGTCCAATGCATCTCTCTGATCGGGTTCGATCGGGTTTGCATTTGACTCATGTTACTTTTAGTCCGAATGGAGAAGAGATTCTGCTTAGCTATAGTGGAGAACATGTATACTTGATGAATGTAAATCATGCTGGCCTAAATACAATGCAGTATACATCAGGAGATGTTTCTAAGTTAATGAGCTTCACTCCTGTACTCAACGGATTGGAATTGCAGCATCCGGTTTCCAATCTATCAAATGGTTTGCCTTTAAATTGTGGTGTTAATGCAAAGCTTGATAAATGCAGAAAATTATTACAAATTGCTGAAAAATGCTTGGACGGTGGGAACTACTTTGGTGGAATAGAGGCATGCAATGAAATTTTGGATGGATATGGTCGTAATATTGGTGTTATTTTCAAGCACGATACATTATGCACACGTGCTGCCTTATTACTCAAGCGGAAGTGGAAGAATGATGTTCATATGGCCATAAGAGATTGTTATAGTGCTAGGAAAATGGATCATTCCTCTTTCAGAGCACATTACTACATGTGCGAAGCTCTATCGCAGCTGGGTAGACATAAGGAAGCCCTAGATTTTGCATTTGCTGCTCAGTGTTTAGCCCCATCTAACCCTGAAGTGGCAGAGAAGGTGGAAAGTGTAAAGAGGGAACTCGCAGCAGCTGAACTGGAAAAATCAAATAAAGGCAATGATGGAGCTCTAAGATCAGCACCGTTAGGTGGTGTATTATCATTAAGTGACTTTCTTTACCGCTCAGATGCAAATAGTGATGTTTCACAAGATGGGCTGAGATCAGAAAGAGAAGATTCTGATTATGATGAGGAGGTGGAGCTGGACTTTGAAACCTTATCAGGTGATGAAGCCCATGATGTCGATTCCAACGTTCTACATGGAAGTTTAAATCTTAGAATACATAGACGAGTTGATCCAGCAAGAGAAAGGGTTGGCCCAAATGGCTCCTGTGGGTCTCCTTCATCATCACAAAATGATGCAACACTTTATCAGCCGGAACCCGTCATTGATATGAAGCAAAGATATGTAGGTCATTGTAACATCGGAACTGATATTAAACAAGCCAGTTTTCTCGGGCAAAGAGGTGAATACGTTGCCAGTGGTAGCGATGATGGTAGATGGTTTATTTGGGAAAAGGGAACTGGTAGACTGATTAAAATACTTGTTGGAGATGGAGCTGTTGTGAATTGTGTTCAAAGTCATCCATTTGATTGTGCCATCGCTACTAGCGGGATCGACAATACCATAAAGCTATGGACTCCAACTGATCCAGTCCCGTCACTCATAGCCGGTGGAGCGGTCGGACCGCAGGCAGCCGACGTGTTGGCTGTAATAGAGAATAATCAGCGCAGACTCTGCCGTAATAGAGAAGCCATACTGCCTTTTGAAATTTTAGAGCGAGTTGATAGTTTTTGTTTATATGGATTCGCGAAGAAATTGGAATAG 3030 44.88 MASAIPENLTREQYVYLSKLSEQAERYEEMVQFMQKLVLSSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEDHVVLVKDYRSKVESELTDVCASILKLLDSNLIPSSSSGESKVFYLKMKGDYHRYLAEFKIGEERKSAAEDTMLAYKAAQDIAAADLAPTHPIRLGLALNFSVFYFEILNQPDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTQIIGRSLIPSRVSLSSLSSHGGLRLSRSQRLRFAREQAHQLSSRSYLWFADALVIHPKTLPGKGTGVAWNSSGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLRGRGQDDNPISSSALYQCHTRRVKKLAVEIGNPNVVWSASEDGTLRQHDFREGMSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDVSSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSDRVRSGLHLTHVTFSPNGEEILLSYSGEHVYLMNVNHAGLNTMQYTSGDVSKLMSFTPVLNGLELQHPVSNLSNGLPLNCGVNAKLDKCRKLLQIAEKCLDGGNYFGGIEACNEILDGYGRNIGVIFKHDTLCTRAALLLKRKWKNDVHMAIRDCYSARKMDHSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRELAAAELEKSNKGNDGALRSAPLGGVLSLSDFLYRSDANSDVSQDGLRSEREDSDYDEEVELDFETLSGDEAHDVDSNVLHGSLNLRIHRRVDPARERVGPNGSCGSPSSSQNDATLYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKGTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTDPVPSLIAGGAVGPQAADVLAVIENNQRRLCRNREAILPFEILERVDSFCLYGFAKKLE 1009
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27424338 27444139 - CaPI482276_11g014700.1 Cam11g1470 140392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1470 1009 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Cam11g1470 1009 Pfam 14-3-3 protein 18 242 IPR023410 -
Cam11g1470 1009 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cam11g1470 1009 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cam11g1470 1009 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cam11g1470 1009 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cam11g1470 1009 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cam11g1470 1009 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cam11g1470 1009 FunFam 14-3-3 protein epsilon 8 251 - -
Cam11g1470 1009 MobiDBLite consensus disorder prediction 779 798 - -
Cam11g1470 1009 FunFam Transducin family protein / WD-40 repeat family protein 817 991 - -
Cam11g1470 1009 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 312 987 IPR045151 GO:0005737(PANTHER)|GO:0045717(PANTHER)|GO:0080008(PANTHER)
Cam11g1470 1009 SUPERFAMILY TPR-like 615 734 IPR011990 GO:0005515(InterPro)
Cam11g1470 1009 SMART WD40_4 392 432 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 SMART WD40_4 863 906 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 SMART WD40_4 298 334 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 SMART WD40_4 460 500 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 SMART WD40_4 337 379 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 SMART WD40_4 909 948 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 SUPERFAMILY WD40 repeat-like 309 947 IPR036322 GO:0005515(InterPro)
Cam11g1470 1009 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Cam11g1470 1009 Pfam WD domain, G-beta repeat 310 334 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 Pfam WD domain, G-beta repeat 911 947 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Cam11g1470 1009 SMART 1433_4 11 255 IPR023410 -
Cam11g1470 1009 MobiDBLite consensus disorder prediction 831 856 - -
Cam11g1470 1009 Gene3D - 865 989 IPR015943 GO:0005515(InterPro)
Cam11g1470 1009 ProSiteProfiles Trp-Asp (WD) repeats profile. 916 947 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 Coils Coil 728 755 - -
Cam11g1470 1009 ProSiteProfiles Trp-Asp (WD) repeats profile. 312 343 IPR001680 GO:0005515(InterPro)
Cam11g1470 1009 Coils Coil 17 37 - -
Cam11g1470 1009 Gene3D - 303 590 IPR015943 GO:0005515(InterPro)
Cam11g1470 1009 Gene3D - 2 250 IPR036815 -
Cam11g1470 1009 Gene3D Tetratricopeptide repeat domain 610 758 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1580 Cam-Chr8:21977294 Cam11g1470 Cam-Chr11:27424338 7.80E-102 dispersed
Cam11g1440 Cam-Chr11:27102452 Cam11g1470 Cam-Chr11:27424338 4.50E-83 dispersed
Cam11g1448 Cam-Chr11:27210148 Cam11g1470 Cam-Chr11:27424338 2.90E-101 dispersed
Cam11g1470 Cam-Chr11:27424338 Cam02g0408 Cam-Chr2:4821698 1.10E-18 dispersed
Cam02g2150 Cam-Chr2:34296113 Cam11g1470 Cam-Chr11:27424338 2.20E-17 transposed
Cam11g1470 Cam-Chr11:27424338 Cam08g1643 Cam-Chr8:22633405 5.30E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1470 K11807 - csv:101206836 1308.89