Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1485 | ATGCCGCATAGAACGACTTACTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCGGCGTCAACCTCCAAACACATTTTGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACCGAAAGCGACGCGAAACCGACCCCGAGGCCAGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTGCCTGCTTTTTACGATTGGTTGGTGGACAAGAAAGCAACGCGATCGGCATCAGCTCACGTGAAAACTTGGCTTTCCAACTGCGACGAGGACCGCGAGCTTTTGCTTCCGCCACCTACCTCGGAGCCGGAGCATGATACATCGTCGGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGAGAGTAGCTATGCGGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGAAACTTTTCCAGCGACGTCAAGGATTCATCGGCGTCAAAGATATTATCCTCGCACCCGGCGAGGCCGGAAGAGATTGAGGCTGTAGATGGTAAGGAAAGCATAGCACAGAGAGCGAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCATCGCTTCGTTCCCATGCTAGTCTGGCTGGCGATCCTGTGCTCATGGAGGAATGCAGGATGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCCTACTCCGACAAAATATCAGATGGTTTCTACAATATTCTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGCTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTGATTCTTGTGGATAGACATGGGGACTCTCGACTGAAAGAGCTTGAAGACAAGGCACAGGAACTATATTGTGCTTCAGAGAGCACCTTAGTGTTGGTGGAGAAACTAGGAAAGCTTGTTGCGATCTACATGGGGGGCACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTACATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTCCAGAAATGCATTGTTCTTCCAATTGGTAGTCTTTCTATGGGACTATGCAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTACATAGGTTTGCCATGTCGGATAGCTAGAGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCGGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCGTCAATGCCTTCACCGCTCCACATTTCTCATTTAAAAGAGTTTCAAGAACCTTACGTGGAAAGTTATCTCAATCATCAAACTGTTGGGTCAAAGCAAATCTGTGGATTTCCTGAAAATCCTCTACGTTCAGGTTATGGAGAGTACCAGATGAAAGGGGGAAGCACTTTACATAGGAGTTCAGGGGCTGAAACTGATAAATTGGTTGATCAAGCTTGTATGGGTATGAGATCAACTCAGTTCTGTGTGGAGACAAAATTGAGCAAGGAGTGTGTGCTTCAGAGTCATATAATGCCAGCCACTGGTGCTGTTGCCGCCGAGGTGTTGAGTTCTGTTGGCACTGAATCTTTACGTGAAAACAAAGTTGTCATTGAAGAAATATACCAAGAAGAGGCGGTTGTGGCGGGGATTTCGCTGAATGAAACTAGCATTAATCCATCCAAATTAAGCTTGTCAACTCAAACTGCCTCAAAGGAGGTTGAGGGTAGGTCTCAAAATTGTTCAGCATCAACATATCCGAATTATCTGACGCTTGAACCTTCACTTGCAATGGATTGGCTGGAAATTTCATGGGATGAACTACATATAAAGGAGCGTGTCGGAGCTGGCTCCTTTGGTACAGTGCACCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACTGTGCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTTATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAATATCTGCCCAGGGGTAGTCTATACCGCCTAATCCACAGGCCATCTTCTGGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCATTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTGAAGGTTTGTGATTTTGGGTTGTCCAGATTCAAAGCAAACACTTTCATATCATCGAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCGGAATTCCTTCGTGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTCGGCCCGGCTCAGGTCGTGGGAGCTGTCGCTTTCCAAAATAGAAAGCTTTCTATCCCACCAAGTACTTCTCCGTTGTTGGCTTCCCTTATTGAATCTTGCTGGGCAGATGATCCTGTTCAGCGCCCATCCTTCACAAGCATCGTCGAGTCCCTAAAGAAATTGCTGAAATCTCCACAGCAGTTGATAGCCATGGGTGGAACGAAGAATGCTCTCTTCTCTCAAGTGAACTTGTCCCTGCCAAGCAATTTTATGATTGGCAAATCAACAACCTGGATCTGCCTCCTTTCTTTGAAAACTGGAGCAAAGGAATGCAGAATCTGCATCGATGACTTTAGCGGAAGAACTGATGAGGTCTTACGAACGTCAAGGAAACAAATTCATTTCCTCGTGTTTCTTTATCAACAGTCCCATTTCCAACTTGGGCTATTTGATTCTCCTTTAGTTGCAGGTCTTCTAGCATCCTGTGTGTTAGATTTAGATGTGTCTCCTCACGTTTGA | 3072 | 46.35 | MPHRTTYFFPRQFPDRGFDSASTSKHILDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKAQSNKKLPAFYDWLVDKKATRSASAHVKTWLSNCDEDRELLLPPPTSEPEHDTSSVKDRSVDRNFDRQVSLPRVSSESSYAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHPARPEEIEAVDGKESIAQRAKESYYLQLALAASLRSHASLAGDPVLMEECRMEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRHGDSRLKELEDKAQELYCASESTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGFQSSMPSPLHISHLKEFQEPYVESYLNHQTVGSKQICGFPENPLRSGYGEYQMKGGSTLHRSSGAETDKLVDQACMGMRSTQFCVETKLSKECVLQSHIMPATGAVAAEVLSSVGTESLRENKVVIEEIYQEEAVVAGISLNETSINPSKLSLSTQTASKEVEGRSQNCSASTYPNYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPSTSPLLASLIESCWADDPVQRPSFTSIVESLKKLLKSPQQLIAMGGTKNALFSQVNLSLPSNFMIGKSTTWICLLSLKTGAKECRICIDDFSGRTDEVLRTSRKQIHFLVFLYQQSHFQLGLFDSPLVAGLLASCVLDLDVSPHV | 1023 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27592838 | 27601653 | - | CaPI482276_11g014850.1 | Cam11g1485 | 140407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1485 | 1023 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 218 | 913 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cam11g1485 | 1023 | Pfam | Protein tyrosine and serine/threonine kinase | 655 | 909 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1485 | 1023 | SUPERFAMILY | Protein kinase-like (PK-like) | 629 | 908 | IPR011009 | - | |
Cam11g1485 | 1023 | MobiDBLite | consensus disorder prediction | 27 | 57 | - | - | |
Cam11g1485 | 1023 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 241 | 449 | - | - | |
Cam11g1485 | 1023 | CDD | STKc_MAP3K-like | 661 | 909 | - | - | |
Cam11g1485 | 1023 | ProSiteProfiles | Protein kinase domain profile. | 655 | 913 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam11g1485 | 1023 | FunFam | Serine/threonine-protein kinase CTR1 | 734 | 919 | - | - | |
Cam11g1485 | 1023 | SMART | serkin_6 | 655 | 913 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam11g1485 | 1023 | Gene3D | Transferase(Phosphotransferase) domain 1 | 734 | 921 | - | - | |
Cam11g1485 | 1023 | Gene3D | Phosphorylase Kinase; domain 1 | 648 | 732 | - | - | |
Cam11g1485 | 1023 | MobiDBLite | consensus disorder prediction | 109 | 137 | - | - | |
Cam11g1485 | 1023 | ProSitePatterns | Protein kinases ATP-binding region signature. | 661 | 682 | IPR017441 | GO:0005524(InterPro) | |
Cam11g1485 | 1023 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 776 | 788 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1485 | 1023 | PRINTS | Tyrosine kinase catalytic domain signature | 880 | 902 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1485 | 1023 | PRINTS | Tyrosine kinase catalytic domain signature | 770 | 788 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1485 | 1023 | PRINTS | Tyrosine kinase catalytic domain signature | 729 | 742 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1485 | 1023 | PRINTS | Tyrosine kinase catalytic domain signature | 836 | 858 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g1485 | 1023 | MobiDBLite | consensus disorder prediction | 109 | 145 | - | - | |
Cam11g1485 | 1023 | FunFam | Serine/threonine-protein kinase isoform 1 | 645 | 733 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g0428 | Cam-Chr3:5292833 | Cam11g1485 | Cam-Chr11:27592838 | 6.10E-49 | dispersed | |
Cam04g1004 | Cam-Chr4:24214167 | Cam11g1485 | Cam-Chr11:27592838 | 1.10E-172 | dispersed | |
Cam05g1951 | Cam-Chr5:28405675 | Cam11g1485 | Cam-Chr11:27592838 | 1.10E-113 | dispersed | |
Cam09g1398 | Cam-Chr9:20645108 | Cam11g1485 | Cam-Chr11:27592838 | 2.40E-40 | dispersed | |
Cam10g1900 | Cam-Chr10:33075448 | Cam11g1485 | Cam-Chr11:27592838 | 4.30E-173 | dispersed | |
Cam11g1142 | Cam-Chr11:22404977 | Cam11g1485 | Cam-Chr11:27592838 | 4.90E-42 | dispersed | |
Cam11g1283 | Cam-Chr11:25366720 | Cam11g1485 | Cam-Chr11:27592838 | 8.50E-48 | dispersed | |
Cam11g1485 | Cam-Chr11:27592838 | Cam08g1820 | Cam-Chr8:24290313 | 1.90E-34 | dispersed | |
Cam04g1097 | Cam-Chr4:25112975 | Cam11g1485 | Cam-Chr11:27592838 | 4.10E-119 | transposed | |
Cam11g1485 | Cam-Chr11:27592838 | Cam09g0034 | Cam-Chr9:1303745 | 2.40E-29 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85589 | PF07714 | PK_Tyr_Ser-Thr | 7.00E-64 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1485 | - | - | - | 0.0 |