Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1489 ATGGATGATCAATTAAAATATCGTCCAAACCCTAACATGCTCATCAGTAAAACAGAAGGAGCTGCTGAGGATAGGATGGAGATGGTATGTCCACCAAAGTTTGCCCCTACCTCTATAGAAGAAAATAAGAAGTCTAGGAAGGAAAGATCAAATTCATTGAGAAAGGATTTAGAGACACTCCGACGAGTTAGACAAAGTGATTATATGATGGAGTTGATGGATGACATGTCTGGGAAACCTGAAGAGATTAAAGAAACTGTTGGACTCGAAAATAGAGAAGTTGCTAGATATGTGGCAACAATGGAGGAACGTGACCAAAGAGAAGAGGAGCTTTTCACTCTTGCCCCGATGGGTGGTGTAACTGATAGTTTCTATGAAGACGTAAAATCCTTGCCCTTGAAAGGTGCTGATGGTGAGCAACCCACAGATTTTGGTAATGGTAGTGGCAGAATGAGACAACATAAGAAACGCAAGGTTTGTCACATAGGACTTTGA 495 41.21 MDDQLKYRPNPNMLISKTEGAAEDRMEMVCPPKFAPTSIEENKKSRKERSNSLRKDLETLRRVRQSDYMMELMDDMSGKPEEIKETVGLENREVARYVATMEERDQREEELFTLAPMGGVTDSFYEDVKSLPLKGADGEQPTDFGNGSGRMRQHKKRKVCHIGL 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27707307 27708705 + CaPI482276_11g014890.1 Cam11g1489 140411

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1489 164 MobiDBLite consensus disorder prediction 1 58 - -
Cam11g1489 164 MobiDBLite consensus disorder prediction 39 58 - -
Cam11g1489 164 MobiDBLite consensus disorder prediction 132 156 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1489 K14765 - - csv:101204682 246.514
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0837 Cam-Chr2:10825582 Cam11g1489 Cam-Chr11:27707307 3.20E-65 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g534 . . . . . . . . . . Cma01g01470 . . . . . . . . . . . . . . . . . . . . Cone4ag1287 Cone7ag0866 . . Lsi04g02286 Csa03g04502 . . . . . . . . . . Sed05g1553 Cmo01g01526 . . . . . . Cpe02g00482 Bhi09g02514 Tan01g3865 Cmetu04g2990 . Hepe01g2178 Mch11g0717 . Cla11g01435 Cam11g1489 . . Clacu11g1651 Cmu11g1468 Cre11g1886 . . . Cme04g00229