Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1507 TTGCATCGGCGAGGTAAAGTTGAAAGATGGCTTGAAGAACTGTGGATGAGAATGTTGAAGTTTAAAGATGAGGTTTTGGCAGTTGCTATAGAGCCTGGTTCTGTTGGGAAGAGGTTGCTGGCTTTGAAATTTTTGGAAACATATGTTCTACTTTTTACACCCGATACAAATGATCCACAGAAAGCTATCTCAGAAGGAAGTAGGGACGTTTTTAACATTTCATGGCTAGATGGTGGGTTTCCTATTTTGGATCCAGTTGGGCTAATGTCAGAAGCTAATAGGATGCTTGGTATTCTGTTGAATTTGTTGCAGACCAGTTCTGTTCCTGGTACATACACAGTAACAGTTGTCAGTAGTTTAGCAGCTATAGCAAGGAAAAGACCAGTTCATTATGGTAACATTTTGTCGGCACTGCTGGAATTTGTTCCAAGTTTTGAGACGATAAGAGGGCGTCATGCTGCCAGCATACAGTATTCTATAAGATCTGCCCTTTTGGGATTCCTAAGGTGTATGCATCCGGCTTTTGTAGAGTCAAGAGATAGATTGCTAAAGGCTTTAAGAGCTATAAATGCTGGAGACGCTGCAGATCAAGTAATCAGGCAAGTGGACAAAATGGTGAAAGCTGCAGATCGAGCTTCACGTGATGCTTGGCTGGGCAAGGATGACCAATCTTCAAATCAGCTTAATGCATCAGTGGATCTAACAAGAAAAAGACCTAGGCTTCTGGACGACGATGATCTTCCCAATGGTCGAGAGGCTTTCAAGCAATTCCGCTTTGGTCCAGATGTTCACCCAATTTCCACGTCTCAAAAAGATGGTTCTCTTCAGAATGCCACCTCTAATGGGACATCCCACGATGTTCCTACGTTAGATGTTGAACTGACTCCTGCAGAGCAGATGATTGCGATGATTGGTGCCTTACTTGCTGAAGGGGAGCGAGGTGCAGAGTCGCTTGAAATTTTGATTTCAAATATTCATCCCGACTTGTTGGCTGATATTGTCATAACTAACATGAAGAACTTGCCCAAAGCTTCCCTTCCTTTATCTTGGCATGGGGACTTGCCTGTAACTCGACAAGGAAGTAGTCATGTACAGGTTCTGGTGCCATCAGCCCCACTGAGTTCTGTGCAAACTTCAGTTGCTACTGCACAAGTTCCTTTTTCTTCGGCCACCTCAGCTGGTTCAACTTTTGCTGAGTCTACTGTCAATAGTCTCCCCGTTGATTCTAAACGTGATCCAAGAAGGGATCCCCGCCGCCTTGATCCTCGTCGTGGAGGAGTATCTTCTGCTTCTAATGTGGAAGAGGCAAGTTCAAATACATCTGATGTTGATGGCTCCATATCTTTGGGAAAATCTGCTTCGGTTCCAGTTCCTGTGACAATCGAGAATTCTTCGGTATCTCTTATATCAAAAACGAATGTTGAAGAAAAAATTATGGAGACTCAATTCGTGTTTGGAACAGATCAATCAACCCCCAAATCCAGATCTCCTGATAGACCTGAGAAAGCCGACTCTATCTTAGACATTAATGCCCCTCTGGATCCCATGCCTACTACTGTCGAAAAAGCTGATGATGGTTTAGTTGCAGTTAACTTGTTTGATGACTTGGCAACTAAGAGGGATGATACATCGTCTTCTATAGAATACAATCAGTATTCTCCATCAGTTACAAATGCAGCTGCTTCTGAAGATACCTGTGAGGAGTTGCCTTTGCTTCCACCATACGTTGACTTGACTCCAGAACAGCAAACAACTGTAAGAAATTTGGCAGCTGAAAAGATATTTGATTCATGCAAGAATTTAAATGGGGCAGACTGTCATCAGATACGCTTGGCAATAATTGCTCGATTGGTTGCTCAGGTTGGTGCTGATGATGATATTGTTCGAATGTTGGAAAAGCAAGTTGCTGTCGACTACCAACAGCAAAAGGGACATGAGCTTGCTTTGCATGTCTTATATCACCTGCATTCACTTGATATTCTGGATTCAGTGGAAAGTTCTTCTTTCGCTGTGTATGAGAAGTTTCTTCTAGTTGTGGCTAAATCGTTGCTAGATGCTTTTCCAGCTTCGGACAAATCTTTTAGTAGACTTCTTGGTGAAGTTCCAGTTTTGCCGGACTCTACCTTGGAACTATTACATAACCTTTGCTATTGTGATATTACTGACAACCAGGGGAAGGGTTCTCCTGATATTGAACGTGTCACACAAGGCCTTGGCACTGTTTGGAATTTGATTGTGAAGCGTCCATATAGTCGGCAAGCTTGCTTAGATATTGCTCTGAAGTGTGCTATGCATTCAGAAGTTAAGGTTCGAGCAACAGCTATTAGACTGGTGGCAAACAAACTCTACCGGTTAAGTTACATTTCAGATAGGATTGAGCAACATGCAACAAACATGTTCCTGTCCGCAGTAGATGACATAGATCAGACAGATGTAGAGCCTTCGCCACATGGATCAATTGAACAAAGAACTGCAGGAGAGGGTGAGAGTCAGGAAACATCCGTTGGTGGTTCTCAAGTGTCAGATCCCGGAACCTCAGAAAACGATTCAATGAAGAGTTCACAACCTACAGTACATGGCAGTTCAACCTTGTCACTTTCAGAAGCCGAAAGACATATTTCTCTTCTTTTTGCTCTATGCATGAAGAAACCTTGTCTGCTTCGGTTTGTATTTGATGCTTATGGACGGGCTCCTAGAGCAGTGAAAGAGGCCGTTCATGAACATATCCCTAATCTTATTACGGCCCTAGGGTCATCTGATTCTGACTTGCTTAGAATAATATCAGATCCACCTCCAGGAAGTGAACATCTGTTAGCATTGGTACTACAGGTACTAACTCAAGAGACGACGCCTTCTTCTGATCTGATTGCAACTGTTAAACATTTATATGAAACTAAACTGAAGGATGTGACGATTCTCATTCCAATGTTGTCCTCACTTTCCAAAAATGAGGTTTTACCTGTTTTTCCTCGGCTGGTTGATCTTCCATTAGAGAAGTTTCAGAGAGCATTGGCTTACATATTACAGGGTTCAGCACATACACGCCCAGCCTTAACACCTGTTGAAGTATTGATTGCCATCCACAACATAATTCCTGAAAAAGACGGCCTTCCATTAAAGAAGATAACGGATGCTTGTTCAGCTTGTTTCGAGCAACGTACAGTTTTCACTCAGCAGGTTTTAGCAAAAGCCTTGAGCCAGATGGTTGAACAAACTCCACTCCCTCTTCTCTTCATGAGAACTGTGATTCAGGCAATTGATGCTTTTCCTTCTCTGGTTGATTTCGTCATGGAGATACTTTCCAAACTTGTAAACAGACAGGTCTGGAGGATGCCAAAATTGTGGTTTGGTTTTTTGAAATGTGCATTTCAAACACAGCCTCATTCCTTTCGAGTACTATTACAGTTACCACCGCCACAACTTGAAAATGCTTTGAATAAATATGTTAACCTTAAAGGTCCTCTTGCTGCTTATGCCAGCCAGCCCAGCACAAAGTCTACTCTCTCTAGACCAATGCTCGTAGTTCTGGGTCTTGAAAATGAAAGGCATTTGTAG 3555 42.67 LHRRGKVERWLEELWMRMLKFKDEVLAVAIEPGSVGKRLLALKFLETYVLLFTPDTNDPQKAISEGSRDVFNISWLDGGFPILDPVGLMSEANRMLGILLNLLQTSSVPGTYTVTVVSSLAAIARKRPVHYGNILSALLEFVPSFETIRGRHAASIQYSIRSALLGFLRCMHPAFVESRDRLLKALRAINAGDAADQVIRQVDKMVKAADRASRDAWLGKDDQSSNQLNASVDLTRKRPRLLDDDDLPNGREAFKQFRFGPDVHPISTSQKDGSLQNATSNGTSHDVPTLDVELTPAEQMIAMIGALLAEGERGAESLEILISNIHPDLLADIVITNMKNLPKASLPLSWHGDLPVTRQGSSHVQVLVPSAPLSSVQTSVATAQVPFSSATSAGSTFAESTVNSLPVDSKRDPRRDPRRLDPRRGGVSSASNVEEASSNTSDVDGSISLGKSASVPVPVTIENSSVSLISKTNVEEKIMETQFVFGTDQSTPKSRSPDRPEKADSILDINAPLDPMPTTVEKADDGLVAVNLFDDLATKRDDTSSSIEYNQYSPSVTNAAASEDTCEELPLLPPYVDLTPEQQTTVRNLAAEKIFDSCKNLNGADCHQIRLAIIARLVAQVGADDDIVRMLEKQVAVDYQQQKGHELALHVLYHLHSLDILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHNLCYCDITDNQGKGSPDIERVTQGLGTVWNLIVKRPYSRQACLDIALKCAMHSEVKVRATAIRLVANKLYRLSYISDRIEQHATNMFLSAVDDIDQTDVEPSPHGSIEQRTAGEGESQETSVGGSQVSDPGTSENDSMKSSQPTVHGSSTLSLSEAERHISLLFALCMKKPCLLRFVFDAYGRAPRAVKEAVHEHIPNLITALGSSDSDLLRIISDPPPGSEHLLALVLQVLTQETTPSSDLIATVKHLYETKLKDVTILIPMLSSLSKNEVLPVFPRLVDLPLEKFQRALAYILQGSAHTRPALTPVEVLIAIHNIIPEKDGLPLKKITDACSACFEQRTVFTQQVLAKALSQMVEQTPLPLLFMRTVIQAIDAFPSLVDFVMEILSKLVNRQVWRMPKLWFGFLKCAFQTQPHSFRVLLQLPPPQLENALNKYVNLKGPLAAYASQPSTKSTLSRPMLVVLGLENERHL 1184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27900038 27922938 + CaPI482276_11g015070.1 Cam11g1507 140429

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1507 1184 MobiDBLite consensus disorder prediction 430 448 - -
Cam11g1507 1184 MobiDBLite consensus disorder prediction 824 863 - -
Cam11g1507 1184 MobiDBLite consensus disorder prediction 811 863 - -
Cam11g1507 1184 Gene3D - 1 217 IPR011989 -
Cam11g1507 1184 MobiDBLite consensus disorder prediction 408 423 - -
Cam11g1507 1184 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 2 1182 - -
Cam11g1507 1184 MobiDBLite consensus disorder prediction 398 451 - -
Cam11g1507 1184 SUPERFAMILY ARM repeat 572 1146 IPR016024 -
Cam11g1507 1184 MobiDBLite consensus disorder prediction 261 287 - -
Cam11g1507 1184 MobiDBLite consensus disorder prediction 267 287 - -
Cam11g1507 1184 Pfam Symplekin tight junction protein C terminal 969 1147 IPR022075 -
Cam11g1507 1184 Pfam Symplekin/PTA1 N-terminal 13 190 IPR032460 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1507 K06100 - - csv:101202828 2092.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0712 Cam-Chr4:21443819 Cam11g1507 Cam-Chr11:27900038 1.30E-197 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g566 . . . . . . . . . . . Cma09g00609 . . . Cpe06g00470 . . . . . . . . . . . . . . . Cone4ag1271 . . . Lsi04g02305 Csa03g04524 . . . . . . . . . . . . Cmo09g00597 . . . Car09g00540 . Cpe02g00494 Bhi09g02542 Tan01g3889 . . . . . Cla11g01454 Cam11g1507 Cec11g1545 Cco11g1540 Clacu11g1672 Cmu11g1488 Cre11g1908 . . . .