Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1510 ATGCCTCTCCCTTTCTACTTCTTCTTTCTTCAATCTTTCCTTTCTCTTGCCATTGGAACTGACCAGTTTCAATTTTTCTCTTTCATGCAAAAGGGTGTCATCGGGAATTCTCTCCCCTCCGATTGGACTGGAAATTCCTTCTGTAATTTCACCGGAGTTAGCTGTAACCAAAAGGGGTTAGTGGTCGGAATTGATCTCTCTGGCAGGGCTGTTTCCGGGAGGTTTCCGGCGGATGTTTGTTCTTATTTGCCGGAGTTGAGAGTGCTGCGGCTTGGACGGAGTGGCTTTCGTGGAACCTTTCCACGTGGGATAACCAATTGCTCTGTTTTGGAAGAATTGGATATGAGTTTTCTGTCACTGACGGGGACGTTACCGGATTTCTCGCCGTTGAAAACCTTGAGGATTCTCGACATGTCGTACAATAATTTCACCGGTGAATTCCCCTTGTCGGTTTTCAGTTTAACCAATCTCGAGAAGTTGAATTTCAACGAGGACAACAATTTCAATACGTGGCAGTTGCCGGAGAATGTGTCCGGCTTGACGAAGTTGAAATCCATGGTGTTAACGACTTGTATGCTGGAGGGTCGAATTCCGGCGACGATTGGGAATATGACGGCGCTCGTTGACCTTGAATTAAGCGGCAATTTCCTCACCGGAAAAATCCCAAGAGAAATCGGGAATTTGAAGAATTTGAGACAGTTGGAGCTTTATTACAATTCATTAGTCGGAGAAATTCCAGAGGAACTTGGGAATTTAACAGAGCTCGTGGACTTGGACATGTCAGTCAACAAGTTGACTGGGAAACTTCCAGAGTCGATTTGTCGTCTTCCTAAGCTTGAAGTTCTTCAATTTTACAACAACTCATTAACAGGGGAGATTCCAATTTCAATTTCAAATTCAACGACACTCACTATGTTATCCCTTTACGACAACTACATGACGGGACAAGTTCCAAGTAATTTGGGTCAATTCTCTCCCATGGTGGTTCTCGACTTGTCGGAAAATTATTTCTCCGGTCCTTTACCGACAGATGTCTGTGGAGAAGGTAAATTAATGTATTTCCTTGTGTTGGAAAATAAATTTTCCGGTCAAATCCCACCGTCGTACGGTAAATGCCAATCCCTTTTACGGTTTCGAGTCAGTTCGAATATTTTGGAAGGTCCGGTGCCGGTGGGACTTTTGAGTCTTCCTCATGTTTCGATTATTGATTTCGGTAACAATAATTTGAGTGGCGAAATTCCCAATTCTTTTGTTAAAGCGAGGAATCTTTCGGAATTGTTTATGCAGAGTAATAGAATTTCCGGCGTGTTGCCGCCGGAAATTTCTAAAGCTACCAATTTAGTTAAGATTGATCTTAGCAACAATCTCTTGTCTGGTCCAATTCCTTCCGAAATTGGGAATCTCAGAAAGCTTAATTTGTTGCTTTTGCAAGGAAATCACTTGAATTCTTCCATACCCACCTCGCTTTCTGAGCTTAAATCTCTTAATGTTCTTGATTTATCCGATAATCGATTAACGGGTAACATCCCAGAAAGTCTATGTGAATTGCTACCGAATTCAATCAATTTCTCAAACAATCAACTCTCTGGTCCAATTCCTCTGTCTTTAATCAAAGGTGGATTAGTGGAAAGCTTTTCCGGAAACCCTGGACTTTGCGTTTCGGTTTATTTAGATTCATCAGATCAGAAATTCCCAATTTGTTCTCAAAATTACAACAAAAAGCGATTGGATTCCATCTGGGCAATCGGAATATCGGCGTTCATAATCTTCATCGGAGCTGCTCTATATTTAAGACGACGATTCAGTAGAGAAAAATCGATAATGGAACAAGACGAAACACTATCTTCATCGTTCTTCTCATACGATGTGAAAAGTTTCCATCGAATCAGCTTCGACCCAAGAGAGATAATTGAATCGATGGTGGATAAGAACATCGTCGGCCATGGCGGCTCCGGTACGGTGTACAAAATAGAGTTAAGCAGTGGGGAAATCGTAGCCGTTAAAAGGCTGTGGAGTCGAAAGGGGAAAGATACGACGTCGGATCAAGAACAGTTGTATTTGGACAAAGAACTAAAAACAGAGGTGGAAACATTAGGGAGTATAAGGCATAAAAACATAGTGAAATTGTATTGCTATTTCTCAAGCTTGGATTGCAGTTTATTGGTTTATGAGTATATGCCAAATGGGAATTTATGGGATGCTTTGCATAAGGGTTGGATTCATTTGGATTGGCCAACTAGACATCAAATTGCTTTGGGTATAGCCCAAGGCTTGGCTTACCTTCATCATGATTTGTTGCCTTCTATAATCCATAGAGACATTAAAACCACTAATATTCTCTTAGATGTCAATTATCATCCCAAAGTTGCAGATTTTGGTATTGCTAAGGTTTTGCAAGCTAGAACGGGCAAGGATTCTACCACCACCGTCATCGCCGGTACTTACGGCTATCTCGCTCCAGAGTATGCATATTCGTCAAAAGCTACAACAAAGTGCGATGTGTACAGCTTTGGAATCGTGTTGATGGAGCTAATAACAGGAAAGAAACCGGTGGAGGCAGAGTTTGGGGAGAACAAGAACATCATATATTGGGTTTCAAACAAAGTAGACACAAAGGAAGGAGCAATGGAAGTATTAGACAAAAGAGTTTCAGGATCATTCAAAGATGAGATGATTGAAGTTCTAAGGATTGCAATTCGTTGTACGTACAAGAATCCAGCCCTTAGACCCACCATGAAGGAAGTGGTTCAACTATTGATTGAAGCTGACCCTTGCAAATTCGATTCTCACAACAAATGCCCCAAACACACCACCACCAAAATCAACAACCCATTTGACCTATGA 2844 41.63 MPLPFYFFFLQSFLSLAIGTDQFQFFSFMQKGVIGNSLPSDWTGNSFCNFTGVSCNQKGLVVGIDLSGRAVSGRFPADVCSYLPELRVLRLGRSGFRGTFPRGITNCSVLEELDMSFLSLTGTLPDFSPLKTLRILDMSYNNFTGEFPLSVFSLTNLEKLNFNEDNNFNTWQLPENVSGLTKLKSMVLTTCMLEGRIPATIGNMTALVDLELSGNFLTGKIPREIGNLKNLRQLELYYNSLVGEIPEELGNLTELVDLDMSVNKLTGKLPESICRLPKLEVLQFYNNSLTGEIPISISNSTTLTMLSLYDNYMTGQVPSNLGQFSPMVVLDLSENYFSGPLPTDVCGEGKLMYFLVLENKFSGQIPPSYGKCQSLLRFRVSSNILEGPVPVGLLSLPHVSIIDFGNNNLSGEIPNSFVKARNLSELFMQSNRISGVLPPEISKATNLVKIDLSNNLLSGPIPSEIGNLRKLNLLLLQGNHLNSSIPTSLSELKSLNVLDLSDNRLTGNIPESLCELLPNSINFSNNQLSGPIPLSLIKGGLVESFSGNPGLCVSVYLDSSDQKFPICSQNYNKKRLDSIWAIGISAFIIFIGAALYLRRRFSREKSIMEQDETLSSSFFSYDVKSFHRISFDPREIIESMVDKNIVGHGGSGTVYKIELSSGEIVAVKRLWSRKGKDTTSDQEQLYLDKELKTEVETLGSIRHKNIVKLYCYFSSLDCSLLVYEYMPNGNLWDALHKGWIHLDWPTRHQIALGIAQGLAYLHHDLLPSIIHRDIKTTNILLDVNYHPKVADFGIAKVLQARTGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGIVLMELITGKKPVEAEFGENKNIIYWVSNKVDTKEGAMEVLDKRVSGSFKDEMIEVLRIAIRCTYKNPALRPTMKEVVQLLIEADPCKFDSHNKCPKHTTTKINNPFDL 947
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27968690 27972026 + CaPI482276_11g015100.1 Cam11g1510 140432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1510 947 FunFam Leucine-rich repeat receptor-like protein kinase 170 272 - -
Cam11g1510 947 SMART serkin_6 640 926 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1510 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1510 947 SUPERFAMILY RNI-like 64 340 - -
Cam11g1510 947 SMART LRR_typ_2 276 300 IPR003591 -
Cam11g1510 947 SMART LRR_typ_2 130 154 IPR003591 -
Cam11g1510 947 SMART LRR_typ_2 228 252 IPR003591 -
Cam11g1510 947 SMART LRR_typ_2 492 516 IPR003591 -
Cam11g1510 947 ProSiteProfiles Leucine-rich repeat profile. 494 516 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 Pfam Leucine Rich Repeat 278 299 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 Pfam Leucine Rich Repeat 446 468 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 Pfam Leucine Rich Repeat 133 153 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 Pfam Leucine Rich Repeat 255 276 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 Pfam Leucine Rich Repeat 422 443 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 Pfam Leucine Rich Repeat 494 516 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 Pfam Leucine Rich Repeat 207 228 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 Pfam Leucine Rich Repeat 230 252 IPR001611 GO:0005515(InterPro)
Cam11g1510 947 SUPERFAMILY L domain-like 245 561 - -
Cam11g1510 947 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524(InterPro)
Cam11g1510 947 Pfam Protein kinase domain 643 917 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1510 947 FunFam receptor protein-tyrosine kinase CEPR1 623 725 - -
Cam11g1510 947 Gene3D Phosphorylase Kinase; domain 1 623 725 - -
Cam11g1510 947 Gene3D Transferase(Phosphotransferase) domain 1 726 938 - -
Cam11g1510 947 Gene3D Ribonuclease Inhibitor 353 562 IPR032675 -
Cam11g1510 947 Gene3D Ribonuclease Inhibitor 64 352 IPR032675 -
Cam11g1510 947 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 296 920 IPR051564 GO:0016020(PANTHER)
Cam11g1510 947 SUPERFAMILY Protein kinase-like (PK-like) 627 919 IPR011009 -
Cam11g1510 947 ProSiteProfiles Protein kinase domain profile. 640 920 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1510 947 FunFam leucine-rich repeat receptor-like protein kinase TDR 726 931 - -
Cam11g1510 947 FunFam Receptor protein-tyrosine kinase CEPR1 276 561 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0772 Cam-Chr2:9434848 Cam11g1510 Cam-Chr11:27968690 1.30E-85 dispersed
Cam04g0072 Cam-Chr4:2125335 Cam11g1510 Cam-Chr11:27968690 1.50E-56 dispersed
Cam08g1315 Cam-Chr8:19417830 Cam11g1510 Cam-Chr11:27968690 2.10E-75 dispersed
Cam08g1656 Cam-Chr8:22799268 Cam11g1510 Cam-Chr11:27968690 8.00E-181 dispersed
Cam11g1510 Cam-Chr11:27968690 Cam11g1739 Cam-Chr11:29983053 2.20E-61 dispersed
Cam11g1509 Cam-Chr11:27951395 Cam11g1510 Cam-Chr11:27968690 1.40E-95 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85591 PF00069 Pkinase 1.40E-48 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1510 - - - 0.0