Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1590 ATGGGAGCTGAATCAGGGCTTGCAATGTTTTGTGGAATAATTCATAAAATAAAACCCTACTTAGCTATGATTTCCTTGCAATTTGGATATGCAGGGATGTATATTGTCACGATGCTTTGTCTTAAGAAGGGCATGAACCATTACGTTCTCGCCGTTTATCGACACGTCGTTGCCACCATTGTCATCTCTCCCTTCGCCATCGTCCTCGAAAGAAAAATAAGGCCGAAGATGACATTCCCAATCTTTGCACGAATATTGCTCCTCGGCTTTCTTGAGCCAGTGTTGGATCAAAATCTATACTATGTGGGTTTGAAACTTACTTCAGCAACATTCACTTCTGTCACCATCAATATTCTCCCTGCAGTAACCTTCATTATGGCTCTCATTTTCAGGCTAGAAAGTGTGAATTTGAAGAAGATTCGTAGCATCGCGAAGGTGGTAGGAACATTGGTGACAATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCAATCGTCGACATATTCCACGGCCATGGACGCCACGCCGCCCACCACAGTACTGAGTCCGCCGACCAGCACTGGGTCCTCGGAACCCTCATGCTTCTCGGCAGCATCGTCGGCTGGTCCGGTTTCTTCATCTTGCAATCCTTCACACTGAGGAAATACCCGGCGGAGCTGTCGTTGACCGCCCTGATATGCGTGGCCGGCACGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGCGTGTGGGCCATTGGCTGGGACTCTCGCCTTCTTGCCGCTGTTTATACCGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGAGTGGTGATTCGGGAACGTGGCCCAGTTTTTGTCACCTCTTTTACCCCTCTCTGCATGATTATTACCGCCGTCCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATCGGAGCTATTTTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTAAACAAATTGACGAATCAAAAAAGCGGCGCCACCACCACCGAATTACCGATCACCGCCGAGCCGGAAACCACCGCCACCGCCGAGCGTTGTTCTTCCAAGGCTCCACCGGCGTGA 1125 49.33 MGAESGLAMFCGIIHKIKPYLAMISLQFGYAGMYIVTMLCLKKGMNHYVLAVYRHVVATIVISPFAIVLERKIRPKMTFPIFARILLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNLKKIRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHHSTESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICVAGTVEGSIVTLIMERDFSVWAIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAVLGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHLNKLTNQKSGATTTELPITAEPETTATAERCSSKAPPA 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28644389 28647239 + CaPI482276_11g015900.1 Cam11g1590 140512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1590 374 MobiDBLite consensus disorder prediction 349 374 - -
Cam11g1590 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
Cam11g1590 374 PANTHER WAT1-RELATED PROTEIN 21 342 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam11g1590 374 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020(InterPro)
Cam11g1590 374 Pfam EamA-like transporter family 23 149 IPR000620 GO:0016020(InterPro)
Cam11g1590 374 MobiDBLite consensus disorder prediction 349 367 - -
Cam11g1590 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2054 Cam-Chr9:35133033 Cam11g1590 Cam-Chr11:28644389 1.60E-84 dispersed
Cam10g1612 Cam-Chr10:29909522 Cam11g1590 Cam-Chr11:28644389 2.80E-95 dispersed
Cam11g1297 Cam-Chr11:25663545 Cam11g1590 Cam-Chr11:28644389 1.80E-56 dispersed
Cam11g1347 Cam-Chr11:26181227 Cam11g1590 Cam-Chr11:28644389 4.70E-93 dispersed
Cam11g1590 Cam-Chr11:28644389 Cam11g1626 Cam-Chr11:29009882 2.80E-36 dispersed
Cam06g0896 Cam-Chr6:13081164 Cam11g1590 Cam-Chr11:28644389 6.10E-71 transposed
Cam11g1590 Cam-Chr11:28644389 Cam08g0993 Cam-Chr8:16062190 6.10E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1590 - - - 0.0