Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1595 ATGGCGAGTACAAACACTGTAACAGGATATGGAACCGACGCTCCAAAGATTATTTGGAATGAAGCTCAGCAGAGATTCGAAACAGAGGACAAGAAGGCATATCTTCAGTACGTGATCAAAAATGGAGGTAAAGTTATGGATATGATTCACACTTTCGTTCCTTCTTCCAAAAGGGGTTTGGGATTGGCTTCTCATCTCTGCGTCGCCGCTTTCAATCACGCCAACGCCCATTCCTTGTCCGTTATTCCCTCCTGTTCTTACATTTCTGACACCTTTCTCCCCAGGAATCCAACTTGGAACTATCTTTTGTACTCAGAAGATAAGAAATCAAACCTGTGA 339 43.36 MASTNTVTGYGTDAPKIIWNEAQQRFETEDKKAYLQYVIKNGGKVMDMIHTFVPSSKRGLGLASHLCVAAFNHANAHSLSVIPSCSYISDTFLPRNPTWNYLLYSEDKKSNL 112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28686474 28689397 - CaPI482276_11g015950.1 Cam11g1595 140517

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1595 112 Gene3D - 11 112 - -
Cam11g1595 112 ProSiteProfiles Yjdj-type Gcn5-related N-acetyltransferase (GNAT) domain profile. 16 104 IPR031165 -
Cam11g1595 112 FunFam Acetyltransferase At1g77540 12 107 - -
Cam11g1595 112 Pfam GCN5-related N-acetyl-transferase 25 101 IPR031165 -
Cam11g1595 112 PANTHER PROTEIN NATD1 3 106 IPR045057 -
Cam11g1595 112 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 104 IPR016181 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1595 K06975 - - csv:101218223 216.468
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g273 . Blo12g01129 . Bda03g00008 . . Bma04g00006 . . . . . . . . Cpe06g00631 . . . . . . . . . . . . . . . . Cone7ag1535 . . Lsi04g02389 Csa04g01804 . . . . . . . . . . . . Cmo09g00789 . . . Car09g00711 . . Bhi09g02671 . . . Hepe01g2281 . . Cla11g01535 Cam11g1595 Cec11g1624 Cco11g1625 Clacu11g1753 Cmu11g1569 Cre11g1986 . . Chy07g00646 Cme07g00855