Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1603 ATGGACGGCTATTACGCATTCTCATCGATCTCAACGATTTTTTCTGGATCTGGAGTTGTTGATGTTGCTCATGATGCTACTCCCTGTTTTTCATCTCCATCGGTTGGGAATCGGATGGATATGGCGGCCATGATTAGGAGGGGATCCAAGGTGGACGAGCTTCAATTGGTGACTCTTTGTAGAGAGCGGAAGGAGTTAATCAAAGCCGCGTCTCGTCATCGTTATGCTCTTGCTGCAGCTCATGTTACTTATTTTCAGTCTCTCAAAGACATTGGTGAAGCTATACGCAAATTTGTTGATGAAGAGATTGTGATCTCTGGTGCTGAATCATCATCCTCTCATGGCTCTCCTGTTCTTACACTGCCTTCCGATGAAGGGAAAGGGAACGGGAAGAAACCGAAATCGGGTGAGAAACACAAACACTCGTCTTCTTCTTCCTCGGTTTTACATTCTGCTTCGATAACACACGATCCCTCTCCTCACGAGGACGAGATTGACGGTTCTCACTTGCATTCATCATCTGGATCGGAGTCTGAATCTGAACACAATTCTTCGGGTCATATTCATATCGAGGATAGCCCATTACATGATGAAGGTTATAGCCATCCTCCTTATGCTTTTCCGCCAAGGGATATCCCAGTACAAGATGAAGGTTATAGCCATCCTCCTTATGCTTATCCGCCCAGAGATTTCCCAGTACAAGATGAAGGATATAGCCATCCTCATGGTTATCCGCCAAGGGATATCCCAGTACCAGTTGAAGGTTATAGCCATCCTCCTTATGCTTATCCGCCTAGGGAAATCCCAGTACAAGTTCAAGGTTATAGCCATCCTCCTCCTCATGCTTATCCCCCAAGGGATTGGAGTTCTTCAACAAATACATACACCTATTATATGCAGAAGTCAACCACTCCGGCGACAACTGTAATGTATGATGCGCCTGAAACACATACAGCTTCAGATGGGCAGTGGCCTGGTCCATCGTACAGTTATCCGCCCTATCCACAGTATGGAAACAGTGGGTTCTATGGGTTTTCAATGGGTTCACCACCGGATTATTATAGCATGACCAATCAGCAGCCAAAGCGCCCTGCTACTCCACCGCCCCCGCCTTCTCCACCGAAGGTCTCTGCTTGGGATTTTATGAATGTTTTTGATGGCTATGATAATGGTTACCAGGATTATAATTCGGCAAATAGATATGCGTATGGCTCCATTCAGAGCAGTCCTGATTCCAATGAAGTGAGGGAGAGAGAAGGGATACCTGAATTGGAAGATGAAACAGAGCCTGAAGCTCTGAAAGAAATTAAAGAGAGGAAGAAATTGAAGGTGGAGGCGATGAACAAGAATCTGAATTCAGGGGAGGGAACTTCAAAGTCTGTACCACCACAGAGTAGTGAGGAAAGCTCAAAATCTCTGCCAGTGCCAAATACTGGTAGCTCATCGGTATCTAAGGATAAGGGCATAAATAACAGCCCCGATACAGTCGTGTCGAAGAAATCGGAACAGGAGGAGCCAGTGGAGAAGAAAGAGGTGAGTTTCGAGATTGAGGAGACTTCGACATTGGATATTGAATCTTCCAAGAAAAGTAATTTAGCCACATTTGCGGCCTTTGGTACAAGGGATCTCCAGGAAGTTGTGAGTGAAATTAAGGATGAATTTGAAGCTGCTTCTAGCTATGGGAAAGAGGTTGCCATGTTGCTTGAAGTGGGGAGATTGCCTTATCGGTCTAAGATCACTGTACTTAAAGTTATTCTTTCTCGGATCCAGTACTTGGTGTCCCCTTCCACAGCATCTGCTCAGCCGCCATTGATTTGGTTGGACCCTAAGACAGTGAAAATGGCCAAAGCATACTCTGGGTCTAGCAGTCCTGGCGATGAGTTTGACTTGAAATCTAGAAGCCTTTCATCTACGCTGGAGAGGCTTTATGTATGGGAGAAGAAACTGTATAAAGAAGTTAAGGATGAAGAAAAGTTACGTGTTATTTACGAGAAACTGTGCAAAAAGTTGAAAAGGTTAGATGAACATGGAGCTGATTCCACTAAAATCGATGCTACTCATGCCTCTATTAGAAAATTGTCAACCAAGATCGACGTCTGTATCAAAGCCGCTGATGCTATATCAAGCAGGATCCATAAGTTGCGGGATGAAGAATTGCAGCCTCGATTAACTGAACTTATTCATGGGTGGATAAGAATGTGGAGTTCCATTCTCAAATGTCACCAGAAGCAATTTCAAGCAGTTATGCAGAGTAAAATTCGCTCATTAAAAGCTAGAACCGGCTCTAGAAGAGATGAAAGTTTGAAAGCTACTGTCGATCTCGAAATGGAACTCGTCAATTGGTGCACCAGATTTAACAATTGGATTCGCACCCAAAAAGCTTATGTCGAATCTTTAAATGGATGGCTCCTACGATGCCTGAACAATGAGCCTGAAGAAACGGCTGATGGGGTTGCTCCTTTTTCACCAGGTCGGATGGGAGCTCCGCCAATTTTCATTATTTGCAACGATTGGCACCAAGCTATGCTTGAAATTTCAGAAGATAAAGTGGTTGGTGCCATTCATGGTTTTGCTTTAAACTTGCATGAGTTATGGGAAAGGCAAGATGAGGAACAACGTCAGAGAATCAAAGCCAATTTCCTTTACAAGGATTTTGAAGAACACCTTAGAACCTTGAAAATGGAGAGAGCAATGATAAAATCTGACCAAGATGATGCAGCAGGAGGAACTGCACTGTCAAAAGTTCCTTCTGAAAATGGAATTTCACCGCGGGATGATCTGAAAGCTAATTTAGATTCATTGAGGAAGAAGTTATATGATGAAAGAGCAAAACACAAGGATGCCATTAAACTGGTTCACAACGCTGCTTCAAGTAGCATACAAGCAGGTTTGGTTCCAATTTTTGAGGCTTTGGAAAAATTCAGTTCCGAAGTCATGAAAGCTCATGAGCAACAGGTTGCTTGTGATCGGGAGATACTCTACAACATACCGGCACTTGCAAATCCCGGTTTTGAAAAAATTGGTTTTGCTTTGCTTAGCTTAGCACCTTCATTTGGATGGATAGGAACTGGGATGTTGTATAGAAATTCATTTATTGGTGCATTTGTTGTAAGTTACATTAGGTTCTAG 3129 43.53 MDGYYAFSSISTIFSGSGVVDVAHDATPCFSSPSVGNRMDMAAMIRRGSKVDELQLVTLCRERKELIKAASRHRYALAAAHVTYFQSLKDIGEAIRKFVDEEIVISGAESSSSHGSPVLTLPSDEGKGNGKKPKSGEKHKHSSSSSSVLHSASITHDPSPHEDEIDGSHLHSSSGSESESEHNSSGHIHIEDSPLHDEGYSHPPYAFPPRDIPVQDEGYSHPPYAYPPRDFPVQDEGYSHPHGYPPRDIPVPVEGYSHPPYAYPPREIPVQVQGYSHPPPHAYPPRDWSSSTNTYTYYMQKSTTPATTVMYDAPETHTASDGQWPGPSYSYPPYPQYGNSGFYGFSMGSPPDYYSMTNQQPKRPATPPPPPSPPKVSAWDFMNVFDGYDNGYQDYNSANRYAYGSIQSSPDSNEVREREGIPELEDETEPEALKEIKERKKLKVEAMNKNLNSGEGTSKSVPPQSSEESSKSLPVPNTGSSSVSKDKGINNSPDTVVSKKSEQEEPVEKKEVSFEIEETSTLDIESSKKSNLATFAAFGTRDLQEVVSEIKDEFEAASSYGKEVAMLLEVGRLPYRSKITVLKVILSRIQYLVSPSTASAQPPLIWLDPKTVKMAKAYSGSSSPGDEFDLKSRSLSSTLERLYVWEKKLYKEVKDEEKLRVIYEKLCKKLKRLDEHGADSTKIDATHASIRKLSTKIDVCIKAADAISSRIHKLRDEELQPRLTELIHGWIRMWSSILKCHQKQFQAVMQSKIRSLKARTGSRRDESLKATVDLEMELVNWCTRFNNWIRTQKAYVESLNGWLLRCLNNEPEETADGVAPFSPGRMGAPPIFIICNDWHQAMLEISEDKVVGAIHGFALNLHELWERQDEEQRQRIKANFLYKDFEEHLRTLKMERAMIKSDQDDAAGGTALSKVPSENGISPRDDLKANLDSLRKKLYDERAKHKDAIKLVHNAASSSIQAGLVPIFEALEKFSSEVMKAHEQQVACDREILYNIPALANPGFEKIGFALLSLAPSFGWIGTGMLYRNSFIGAFVVSYIRF 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28775045 28780832 - CaPI482276_11g016030.1 Cam11g1603 140525

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1603 1042 MobiDBLite consensus disorder prediction 403 514 - -
Cam11g1603 1042 MobiDBLite consensus disorder prediction 156 170 - -
Cam11g1603 1042 MobiDBLite consensus disorder prediction 903 926 - -
Cam11g1603 1042 MobiDBLite consensus disorder prediction 498 514 - -
Cam11g1603 1042 Pfam Protein of unknown function (DUF630) 47 102 IPR006868 -
Cam11g1603 1042 MobiDBLite consensus disorder prediction 450 497 - -
Cam11g1603 1042 MobiDBLite consensus disorder prediction 353 375 - -
Cam11g1603 1042 PANTHER UNCHARACTERIZED 47 986 - -
Cam11g1603 1042 MobiDBLite consensus disorder prediction 107 215 - -
Cam11g1603 1042 MobiDBLite consensus disorder prediction 182 198 - -
Cam11g1603 1042 Pfam Protein of unknown function (DUF632) 543 862 IPR006867 -
Cam11g1603 1042 MobiDBLite consensus disorder prediction 430 446 - -
Cam11g1603 1042 Coils Coil 924 944 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1603 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1143 Cam-Chr2:22004715 Cam11g1603 Cam-Chr11:28775045 1.40E-93 dispersed
Cam08g1411 Cam-Chr8:20331836 Cam11g1603 Cam-Chr11:28775045 1.60E-49 dispersed
Cam09g0212 Cam-Chr9:2766548 Cam11g1603 Cam-Chr11:28775045 3.20E-28 dispersed
Cam11g1218 Cam-Chr11:24272624 Cam11g1603 Cam-Chr11:28775045 5.60E-55 dispersed
Cam11g1603 Cam-Chr11:28775045 Cam02g0369 Cam-Chr2:4449205 1.80E-109 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g250 Blo01g01298 . . . Bpe02g00639 . . Bma01g02074 Cmo04g02483 Cmo15g00679 . Cma09g00787 . . Sed01g3115 Cpe06g00621 . Bhi04g01901 Tan11g1265 Cmetu07g2195 . . . . Cla08g00602 Cam08g1016 Cec08g0606 Cco08g0717 Clacu08g0727 . Cre08g0535 Cone4ag1414 Cone7ag1524 Cone17ag1287 Cone20ag0440 Lsi04g02397 Csa04g01791 . Cme03g00538 Blo17g00175 Blo18g00181 . . Bpe02g01646 Bpe14g00385 Bma01g00810 Bma02g00216 . . Cmo09g00779 . . Car04g02297 Car15g00617 Cpe01g02058 . . . . . . . . Cla11g01541 Cam11g1603 Cec11g1631 Cco11g1633 Clacu11g1759 Cmu11g1576 Cre11g1994 Lsi08g00442 . Chy07g00630 Cme07g00838