Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1605 ATGTCGGAAACGAAGGTGTTCGATGCGGCGGCGGCGACGGAGTTGGTGAAGGAACTGAGAGGTAGTTTTGGCTCCGGCAACACTCGGAGCTACGAGTGGAGAGTGGCGCAGCTTGAGAGTCTCTTGAAGCTCAGCGTTGACCATGAGGAAGATATTTGCGATGCGCTTCGCTCTGACCTCTCCAAGCCTGCGTTGGAATCTGTTATTCATGAGGTCTTCGTTCTTAAACTCAACTCCTTAACTGTTCTGATGCTCTGTCGTTTTCTCGTGTTTGACCTGTTATTTTGTTCGCTTTTGCTCGTTATTGTTAATGATTTTTGTGATCAGAGTCTCGTTAGATTCCTGATATCTTCTATTGGATGTTGTTCATATATGTTTTCATGTGTTATCACAGTTTCTTCTCAATCACATCCACCAAATATAGGTAGTGCCTCGCAGTTGCAGTTTGTTCGGGACCATGTGATGATTGAAGAGAACTTTCTGATATCTATGGTAAAAAGTTCGTGTAAATTGGCACTTAAAGAACTCAGAAATTGGATGACACCAGAGAAGGTTCAAACTACAATTACCAGTTTTCCCTCGTCTGCTGCAATTGTACCAGAACCTTTGGGTGTTGTGCTGATCATCTCCGCTTGGAATTATCCATTCTATTTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCTCCAGCAACAGCATCTTTAATAGCAAAACTTCTTGAGAAGTATTTGGATACGTCTGCTGTAAAAGTTGTTGAGGGTGCTATTCCCGAAACTAGTGCTTTGCTGGAGCAAAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGAATAGTGATGGCAGCTGCTGCCAAGCACCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAAAAATCAATTTACAAGTTGCCTGTAGGCGGATTATATCTGGTAAATGGGGTGGTAACAATGGACAAGCATGTGTTTCTCCTGATTACATCATAACTACGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTGAAAGAAGAACTGGAGAGATTTTATGGAAAGAATCCGTTGGAATCTAAAGATATATCTCGCATTGTGAATGCTAGCCACTTTAATCGCTTGACCAAGCTCTTAGATGATGATGAAGTTTCTAGCAAGATTGTTCATGGAGGTGAAAAGGACAAAACCAAATTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCTTTGATTATGACGGAGGAGATATTTGGTCCCTTGCTTCCCATTATCACGGTAGACAAATTGGAGGACAGCTTCGAAATAGTGAATTCGGGCTCAAAGCCACTTGCAGCATATTTATTTACCAACAACAAAAAGCTCAAGGAACAGTTCGTGGCTTGTATCTCTGCAGGCGGCGTGGTTATCAATGACACCACCTTACATCTAGCTGTTAGCACACTACCATTTGGAGGAGTAGGGGAGAGTGGAATGGGATCTTGCCATGGGAAGTTTTCATTTGATGCATTTAGCCATAAGAAAGCTGTTCTTTATCGAAGTTTTGTAGGCGACGTGCCGATGCGATACCCACCTTACACAAACGGAAAGCTTAGATTTCTCAAAGCTCTTCTTGGAGGTGGCATTTTGGAGCTCATTCGTGCCCTTCTTGGTTGGTCGTAA 1725 42.96 MSETKVFDAAAATELVKELRGSFGSGNTRSYEWRVAQLESLLKLSVDHEEDICDALRSDLSKPALESVIHEVFVLKLNSLTVLMLCRFLVFDLLFCSLLLVIVNDFCDQSLVRFLISSIGCCSYMFSCVITVSSQSHPPNIGSASQLQFVRDHVMIEENFLISMVKSSCKLALKELRNWMTPEKVQTTITSFPSSAAIVPEPLGVVLIISAWNYPFYLSLDPVVGAIAAGNAVVLKPSEISPATASLIAKLLEKYLDTSAVKVVEGAIPETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKINLQVACRRIISGKWGGNNGQACVSPDYIITTKEFAPKLVESLKEELERFYGKNPLESKDISRIVNASHFNRLTKLLDDDEVSSKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPIITVDKLEDSFEIVNSGSKPLAAYLFTNNKKLKEQFVACISAGGVVINDTTLHLAVSTLPFGGVGESGMGSCHGKFSFDAFSHKKAVLYRSFVGDVPMRYPPYTNGKLRFLKALLGGGILELIRALLGWS 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28809788 28814951 + CaPI482276_11g016050.1 Cam11g1605 140527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1605 574 PANTHER ALDEHYDE DEHYDROGENASE 158 572 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cam11g1605 574 Pfam Aldehyde dehydrogenase family 169 531 IPR015590 GO:0016491(InterPro)
Cam11g1605 574 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 511 IPR016163 GO:0016620(InterPro)
Cam11g1605 574 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 162 529 IPR016162 GO:0016491(InterPro)
Cam11g1605 574 FunFam Aldehyde dehydrogenase 143 314 - -
Cam11g1605 574 FunFam Aldehyde dehydrogenase 311 511 - -
Cam11g1605 574 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 307 314 IPR029510 GO:0016491(InterPro)
Cam11g1605 574 SUPERFAMILY ALDH-like 165 548 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0105 Cam-Chr9:1848460 Cam11g1605 Cam-Chr11:28809788 8.80E-17 dispersed
Cam11g1604 Cam-Chr11:28799166 Cam11g1605 Cam-Chr11:28809788 4.60E-221 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1605 K00128 - csv:101219569 762.681