Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1710 ATGGCAATGGCGGATTTCAAGCTTCATCGTCTTCTTCTTTCCACCCTCTTTTTATTTCTTTTACTCATTCCTTCCGTGATCGCAGCAGAGGATTGTCAATGTCCCGAAGACACAGAGGAAGACACAGGGGAACGAAATGCAACTTTAGCTATGAAATACAAAGTCATCGCCATAGCTACAATTCTCGTTGCGGGAATCATTGGTGTGGTGATTCCTTTGCTTGGGAAGGTGATTCCGGCGTTAAGTCCGGAGAAGGATATTTTCTTTGTGATTAAAGCTTTTGCTGCTGGAGTTATATTAGCAACTGGATTTATTCATGTTCTACCTGATGCTTATGAAAATCTTACGTCGTCGAAACTGAAAGAGGATCCATGGGGGAAGTTTCCGTTCACTGGTTTAGTGGCTATGGTGGCGGCGATGGCTACTTTGATGGTGGATGCGGGTGCGAGCTCTTATTATACTCGGATTCATCTTAATAAAGCGCAGCCGGAGTTGATTGGAGATGATGAAATGCGGGGAGGCGGCGGTCATGATGGTCATGTTCATGTTCATACTCATGCCACTCATGGACATGCTCATGGCTCCGCCGATGTCGTCGGTTCATCCACCGAGATTCTCCGCCACCGTGTCATTTCTCAGGTATTGGAGCTGGGGATAGTGGTACATTCGGTAATTATAGGAATTGGTTTGGGTGTTTCTGAAACTCCGAAAACAATAAGACCTCTTGTGGCCGCCATCACTTTTCATCAGTTATTTGAAGGCATGGGCCTCGGAGGATGCATCGCTCAGGCAAAATTCAAGAACAGGGCAACAATAATAATGGGGCTTTTCTTTTGCTTGACCACACCAATTGGGATAGCAATAGGCATTGGAGTAACAAAGACTTATGATGAAGATAGCCCAAAAGCACTTATAGTGGAAGGAATTTTGAATGCGGCTTCTTCGGGTATCTTAATCTATATGGCTCTTGTAGATCTTCTTGCTGCTGATTTTATGAACCCCAGAATGCAAAGCAATGGAAAACTTCAACTTTTTGCTAACCTTTCTCTTATTCTTGGAGCTGCCTTGATGTCCTTGCTTGCTATATGGGCATAG 1095 44.47 MAMADFKLHRLLLSTLFLFLLLIPSVIAAEDCQCPEDTEEDTGERNATLAMKYKVIAIATILVAGIIGVVIPLLGKVIPALSPEKDIFFVIKAFAAGVILATGFIHVLPDAYENLTSSKLKEDPWGKFPFTGLVAMVAAMATLMVDAGASSYYTRIHLNKAQPELIGDDEMRGGGGHDGHVHVHTHATHGHAHGSADVVGSSTEILRHRVISQVLELGIVVHSVIIGIGLGVSETPKTIRPLVAAITFHQLFEGMGLGGCIAQAKFKNRATIIMGLFFCLTTPIGIAIGIGVTKTYDEDSPKALIVEGILNAASSGILIYMALVDLLAADFMNPRMQSNGKLQLFANLSLILGAALMSLLAIWA 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29785393 29787530 + CaPI482276_11g017100.1 Cam11g1710 140632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1710 364 PANTHER ZINC/IRON TRANSPORTER 48 363 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cam11g1710 364 NCBIfam ZIP zinc/iron transport family 38 364 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cam11g1710 364 Pfam ZIP Zinc transporter 52 361 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2375 Cam-Chr1:35746170 Cam11g1710 Cam-Chr11:29785393 3.30E-79 dispersed
Cam02g2013 Cam-Chr2:33154607 Cam11g1710 Cam-Chr11:29785393 9.80E-62 dispersed
Cam08g2175 Cam-Chr8:27141642 Cam11g1710 Cam-Chr11:29785393 7.10E-73 dispersed
Cam09g2317 Cam-Chr9:37589690 Cam11g1710 Cam-Chr11:29785393 1.10E-96 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1710 K14709 - csv:101215851 573.548