Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1733 ATGACTGGGAAAATGGGACAGGTAACTATGATCTTGAATGAGGTTCTCAGATTATACCCACCAATGGGTATGATTAGTCATCTTGTTAAAAAAGAAACAAGACTTGGAAAATTGACTTTACCAGCAGGACTTATGTTAGGCTTACCGATTGTTCTTATCCAACATGATCCTAAGCTATGGGGAGAAGATGCAGATGAATTTAAACCAGAAAGATTTTCTGCCGGAGTTTCGAAAGGAACAAAGAATCCAATTGCTTTTCTACCATTTGGTTGGGGTCCTCGAATATGCATAGGATTAAACTTTGCCATAATTGAAGCGAAAATGACATTATCAATGATCCTGCAACGATTTTCATTTGAGCTTTCATCATCATATACACTTGCTCCCACCGTTGTTGTAACAACGCAACCTCAACATGGAGCTCATATCATACTACACAAATTGTAG 447 38.03 MTGKMGQVTMILNEVLRLYPPMGMISHLVKKETRLGKLTLPAGLMLGLPIVLIQHDPKLWGEDADEFKPERFSAGVSKGTKNPIAFLPFGWGPRICIGLNFAIIEAKMTLSMILQRFSFELSSSYTLAPTVVVTTQPQHGAHIILHKL 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29944746 29945192 + CaPI482276_11g017330.1 Cam11g1733 140655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1733 148 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 140 IPR050665 GO:0004497(PANTHER)
Cam11g1733 148 PRINTS E-class P450 group IV signature 5 21 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 PRINTS E-class P450 group IV signature 55 73 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 PRINTS E-class P450 group IV signature 96 114 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 PRINTS E-class P450 group IV signature 80 96 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 89 98 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam11g1733 148 PRINTS P450 superfamily signature 96 107 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 PRINTS P450 superfamily signature 87 96 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 PRINTS P450 superfamily signature 10 21 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 SUPERFAMILY Cytochrome P450 3 146 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 Gene3D Cytochrome P450 2 148 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1733 148 Pfam Cytochrome P450 4 123 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g1733 Cam-Chr11:29944746 Cam11g1736 Cam-Chr11:29965092 5.30E-63 dispersed
Cam11g1733 Cam-Chr11:29944746 Cam11g1734 Cam-Chr11:29949501 3.30E-65 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1733 - - - 0.0