Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam11g1734 | ATGTGGTCTGTGGCAGCTACGATTTCAATTTGGTTAATACTTGTGGTATTATTATTATTATTATTGGGATGCATATTTGTAAACTGGATTTGGTTGAAGCCTAAGAAATTAGAGAAGGTTTTAAGAGAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCTGCCATGAGAGAGCAGGCACTGTCCAAGCCCATGAACTTCTCCAATCATATCGCTCCACGTGTCATTCCATCTATTCATCATACCATCCAGAATTATGGCAAACATTCATTTATGTGGCTTGGACCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTGTTTTCATTGATCAATGATTTCCAAAAGCCAACTATAAATCCCTTTGCCAAGTTGCTTGCAGATGGGATTTTAAATCATGAAGGACCAAAATGGGTCAAACACAGAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTTAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAATGGGAAAACATGGTCTTTGTAGAAGGATCTTGTGAGTTAGATGTCATGCCTTACCTACAAAATATGACTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATTTTGGGAATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACTGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCTGAATGCAAGCTTTTCTATATTGCTGGTCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGTTGAGTTCATACTCAGAATGGCAAGAGCAAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGATTATGATGGCTTAAGTCAACTAAAAGTTGTAACTATGATCTTGAACGAGGTTCTTAGGTTATACCCACCAGTGAGTATGTTTGGTCGTTTTGTTAAAAAAGAAACAAGACTTGGAAAATTAACTTTACCAGCCGGAGTGATGTTGGCCTTACCAACTATTCTTATCCAACGTGATCCTGAGCTATGGGGAGAAGATGCAAATGAATTTAAACCAGAAAGATTTTCTAAGGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTGTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAGTTGGCATTATCAATGATCCTTCAACGCTTCTCATTTGAGCTTTCGTCATCGTATACACATGCTCCCACCGTCACCATAACAACGCAACCTCAACATGGAGCTCATATCATCCTACATAAACTGTAG | 1560 | 37.95 | MWSVAATISIWLILVVLLLLLLGCIFVNWIWLKPKKLEKVLREQGFAGNSYRILYGDLKFRAAMREQALSKPMNFSNHIAPRVIPSIHHTIQNYGKHSFMWLGPIPRVHIMDPEQLKIVFSLINDFQKPTINPFAKLLADGILNHEGPKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWENMVFVEGSCELDVMPYLQNMTADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLGVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKAGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECKLFYIAGQETTATLLVWTMVLLSSYSEWQEQARAEVFEIFGNKKPDYDGLSQLKVVTMILNEVLRLYPPVSMFGRFVKKETRLGKLTLPAGVMLALPTILIQRDPELWGEDANEFKPERFSKGVSKATKNPSAFVPFGWGPRICIGLNFAMIEAKLALSMILQRFSFELSSSYTHAPTVTITTQPQHGAHIILHKL | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 29949501 | 29953239 | + | CaPI482276_11g017340.1 | Cam11g1734 | 140656 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam11g1734 | 519 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | PRINTS | E-class P450 group I signature | 205 | 223 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | FunFam | Cytochrome P450 734A1 | 31 | 519 | - | - | |
| Cam11g1734 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 511 | IPR050665 | GO:0004497(PANTHER) | |
| Cam11g1734 | 519 | Pfam | Cytochrome P450 | 89 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | Gene3D | Cytochrome P450 | 74 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | SUPERFAMILY | Cytochrome P450 | 81 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | CDD | CYP72 | 84 | 515 | - | - | |
| Cam11g1734 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam11g1734 | 519 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g1734 | 519 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g1276 | Cam-Chr6:24071318 | Cam11g1734 | Cam-Chr11:29949501 | 2.30E-108 | dispersed | |
| Cam11g0572 | Cam-Chr11:7240175 | Cam11g1734 | Cam-Chr11:29949501 | 8.00E-90 | dispersed | |
| Cam11g1734 | Cam-Chr11:29949501 | Cam11g1736 | Cam-Chr11:29965092 | 5.40E-280 | dispersed | |
| Cam11g1732 | Cam-Chr11:29934272 | Cam11g1734 | Cam-Chr11:29949501 | 2.10E-89 | proximal | |
| Cam11g1733 | Cam-Chr11:29944746 | Cam11g1734 | Cam-Chr11:29949501 | 3.30E-65 | tandem | |
| Cam11g1734 | Cam-Chr11:29949501 | Cam11g1735 | Cam-Chr11:29956898 | 7.30E-269 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam11g1734 | - | - | - | 0.0 |