Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1735 ATGTCGTCTGTAGCAGCTACGATTTCAATTTGGATAATGCTTGTGGTATTATTATTATTGGGATGCAAATTTCTAAGCTGGATTTGGTTAAAGCCCAAGACATTAGAGAAGGTTTTAAGACAGCAAGGCTTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCCGCCATGAGAGAGCAGGCCATGTCCAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTCTGTTCATCATACCATCCACAAATATGGCAAGAATTCATTTATGTGGCTTGGACCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAACTGTGTTTTCACTTATCAACGATTTCCAAAAGCCAACTATGAATCCCTTTATCAAGTTTCTTGCAGATGGACTTGTAAGTCATGAAGGACCAAAATGGGTCAAACATAGAAAGATAATCAACCCTGCATTTCATTTGGAAAAGCTTAAGGATATGATACCAGCATTCTATCAAAGTTGTAATGAGATGGTTAGCAAATGGGAAAGCATGGTTTCTGTAGAAGGATCTTGTGAGTTAGATGTAATGCCTTTTCTAAAAAATATGGCTGCTGATGTGATTTCTCGAACTGCATTTGGGAGTAGCTATGAGAAAGGAAAAGAGATCTTCAAGCTTCAAACTGAACTAGGTGGTTTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTTCTACCTACAAAGTCAAACAATAAAATGAAAGAGATAAGTAAAGAGATATCAACTTTGGTCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCCGGCGAAGCTATACAAAATGATCTACTAAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCTGAATGCAAGCTTTTCTATATTGTTGGGCAAGAAACTACAGCAACATTACTAACTTGGACTATGGTATTATTGAGTTCATACTTAGAATGGCAAGAGCAAGCAAGAGAAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGATTATGATGGTTTAAGTCGTCTAAAAATTGTAACTATGATCTTAAACGAGGTTCTCAGGTTATACCCACCAGTGAGTATGTTTGAACGTCTCATTAAAAAAGAAACAAAACTTGGAAATTTGACTTTACCAGCAGGAGTGATGTTGGGCTTACCAATTGTTCTTATCCAACATGATCCTGAGTTATGGGGAGATGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAGGGAGTTTCTAAAGCGACAAAAAATCCAAGTGCTTTTATACCATTTGGTTGGGGTCCTCGAATGTGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTGTCAACGATCCTACAACGCTTCTCATTTGAGCTTTCCTCATTCTATACACACGCTCCCGCCACCTCCTTAACCATGCAGCCTCAACATGGAGCTCATCTCAAACTACGCAGACTGTAG 1554 38.61 MSSVAATISIWIMLVVLLLLGCKFLSWIWLKPKTLEKVLRQQGFAGNSYRILYGDLKFRAAMREQAMSKPMNFSNHIAPRVIPSVHHTIHKYGKNSFMWLGPIPRVHIMDPEQLKTVFSLINDFQKPTMNPFIKFLADGLVSHEGPKWVKHRKIINPAFHLEKLKDMIPAFYQSCNEMVSKWESMVSVEGSCELDVMPFLKNMAADVISRTAFGSSYEKGKEIFKLQTELGGLVIQSTLGVYIPGWRFLPTKSNNKMKEISKEISTLVLGIMNEREKSMKAGEAIQNDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECKLFYIVGQETTATLLTWTMVLLSSYLEWQEQAREEVFEIFGNKKPDYDGLSRLKIVTMILNEVLRLYPPVSMFERLIKKETKLGNLTLPAGVMLGLPIVLIQHDPELWGDDADEFKPERFSEGVSKATKNPSAFIPFGWGPRMCIGLNFAMIEAKMALSTILQRFSFELSSFYTHAPATSLTMQPQHGAHLKLRRL 517
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 29956898 29961234 + CaPI482276_11g017350.1 Cam11g1735 140657
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1735 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 Pfam Cytochrome P450 88 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 FunFam Cytochrome P450 734A1 29 517 - -
Cam11g1735 517 SUPERFAMILY Cytochrome P450 79 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam11g1735 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 510 IPR050665 GO:0004497(PANTHER)
Cam11g1735 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam11g1735 517 CDD CYP72 82 512 - -
Cam11g1735 517 Gene3D Cytochrome P450 72 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0786 Cam-Chr10:14784390 Cam11g1735 Cam-Chr11:29956898 1.70E-30 dispersed
Cam11g0267 Cam-Chr11:4179852 Cam11g1735 Cam-Chr11:29956898 4.30E-104 dispersed
Cam11g1734 Cam-Chr11:29949501 Cam11g1735 Cam-Chr11:29956898 7.30E-269 tandem
Cam11g1735 Cam-Chr11:29956898 Cam11g1736 Cam-Chr11:29965092 1.60E-268 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1735 - - - 0.0