Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1755 ATGGAAAATAATAGTCTTGCTCAGGCTATGTTTGGACCTGAAGAAAGTCAGTTGAAATTAGATTGGCCAACAAGGCAGAAAATTTGTATTGGTATAGCCAAAGGCTTGGCTTATCTTCATGAGGAATCAAGATTGAAGATTGTTCACAGAGATATCAAAGCGACTAATGTGTTGTTAGATAAAAATCTCAACCCCAAGATTTCGGACTTTGGTCTTGCCAAGCTTGAAGAAGAAGGAACTACACACATAAGCACTCGAATTGCTGGAACTTTTGTTTATATTGCGCCAGAGTATGCATTGCGAGGTTACTTAACTGATAAAGCAGACGTGTACAGTTTTGGTATTGTGGCCTTGGAAATAGTTAGTGGAAGGAGCAATACTACTTATCGATCAAAGGACGATTGCTTTTATCTGCTTGATTGGGCACTTGAATTAAAAGAAAAAGAGAGTTTAATGGAGCTAGTTGATCCAAGGTTAGGGTCCAATTTCAACCAGAGAGAGGCAATGACCATGATCAATATTGCTCTGCATTGCACCAATGTGGTGCCTGGAGAAAGGCCATGCATGTCTTTAGTGGTGGGGATGTTGGAAGGCAAGGTTGATGTGAAGGAGTTGGTTTCTCATCCAAATGAGTCGAGAGCAGAGATGGGTGCAATGTGGACCATTTTGAAGCAGAGTTTGAAACAAACTGACAATCAGAACCAGGAAGAGATTATGTCTACGGACATGTCAAGTACCAATTATTCTTCAGCATCAATGAGTAGAAACTAG 771 40.47 MENNSLAQAMFGPEESQLKLDWPTRQKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLEEEGTTHISTRIAGTFVYIAPEYALRGYLTDKADVYSFGIVALEIVSGRSNTTYRSKDDCFYLLDWALELKEKESLMELVDPRLGSNFNQREAMTMINIALHCTNVVPGERPCMSLVVGMLEGKVDVKELVSHPNESRAEMGAMWTILKQSLKQTDNQNQEEIMSTDMSSTNYSSASMSRN 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30096990 30098206 - CaPI482276_11g017550.1 Cam11g1755 140677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1755 256 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1 208 - -
Cam11g1755 256 SMART serkin_6 1 196 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1755 256 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1755 256 Pfam Protein kinase domain 20 189 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1755 256 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 241 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam11g1755 256 SUPERFAMILY Protein kinase-like (PK-like) 1 210 IPR011009 -
Cam11g1755 256 MobiDBLite consensus disorder prediction 231 256 - -
Cam11g1755 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1755 256 Gene3D Transferase(Phosphotransferase) domain 1 1 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g1755 Cam-Chr11:30096990 Cam11g1758 Cam-Chr11:30122670 7.60E-102 dispersed
Cam11g1755 Cam-Chr11:30096990 Cam11g1757 Cam-Chr11:30107138 1.10E-97 proximal
Cam11g1755 Cam-Chr11:30096990 Cam07g1057 Cam-Chr7:24920524 2.90E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85598 PF00069 Pkinase 6.70E-26 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1755 - - - 0.0