Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1757 ATGTTCATGGCTCGATTCCTCGCCGTCTTTCTTTTCTTTTCTCTCGTTTCCGCCGTCCCTCAGCTGCCGGCCGACGAAGTTGAAGCGTTAAAGGAGGTCGGAAAGGCATTGGGGAAGGCGGACTGGAATTTCACGGCGAATCCATGCGGCGGTTTGGGTAGCGGTTGGATAACCAATTCTCTCGAAACGGGGTTTGTTAATAATCTCACATGCAACTGCACCTTCCAGAATAACTCCGTTTGTCACGTCACTAAAATCCGTCTAAGGTCACAGAACCTTCCAGGCATTCTGCCGCCACAACTAGTGAGGCTGCCTTACTTGGAAGAACTTGATCTTGCCCGCAACTATATCAGCGGTCCAATTCCTCCAGAATGGGGTGCTTCAAAGCTTGTCAACATTTCCCTTCTTGGAAATCGATTGACGGGTCCAATCCCAAAAGAGATTGGAAACATCAGCACTCTTGTAGAGTTGATCCTTGAAGTTAATCAGTTGTCTGGAAGTCTGCCTCCAGAACTTGGAAAGCTGACCAGGTTATCAAGATTACTTCTTTCCTCAAACAACTTTTCCGGGGAGCTCCCATCTTCACTGGGAGCTATAACCACATTGACGGACCTTCGAATTAGTGATAATCACTTCACAGGGTCAATACCCAAGTATATTCAGAATTGGCCGAATCTTGGAAAACTAGGTATTCAGGCAAGCGGGCTGAGTGGACCAATTCCTTCTGAAATTGGACTTCTGACAAAATTATTGGATCTGAGAATCAGCGACTTGAATGGAGGTTCATCGTCCTTTCCACCCCTTAATTCTTTGACAAAATTGAAAACCCTGATATTGAGGAGCTGCAATATAGTTGGGACGCTGCCTGACAATCTTGATGGGTTGGAAAACGTGCAAACCTTAGACTTTAGCTTCAACAAAATTAGTGGACCAATACCTGCCGGCTTTGAAGCTTTGAAGAAAGTGGATAGAATATATTTAACTGGAAACTTGCTAACTGGAGCTGTGCCTCTTTGGATGCTGCAGGAGGGAGAAAACATTGATCTCTCTTATAACACATTTACTGAGACAGATTTTCAGGCCTTGGGTTGTGAAGCACGAAGTTTAAACCTGTTCGCGAGCTCTTCACAGGACAATACTTCTGGAACAGTTTCATGTTTAGCGGGCACATGTGACAAAACTTGGTACTCTCTCCATATCAATTGCGGTGGGAAGGAAGATTTAATAAACGGAACAATCAGGTTTGATGGAGACACAAACACGGGGAAATCATCATTGTTTTTTCAAGGTGGAGCAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGATGATGATCGCTCAACAGACGACTTCATTGCATTAAGTCCACCTGATCTCCCTATGAAAAATCTTGGATTGTACACCAATGCACGGATTTCTCCCATCTCTCTTACTTATTATGCGTATTGCATGGGTAATGGAAACTACACAGTAAGCCTACATTTTGCTGAGATAGAGTTTAGTAATGACAAATCATACAAAAGCCTTGGCAGACGCATATTTGATGTCTACGTTCAGAGAGAGCTGGTGTTGAAGGATTTTAATATTGCAGAGGCAGCAGGTGGTGTTGGCAAACCTCTTGTAGAGAAATTCACTGTTTCTGTGACTGATGGTACTATAGAGATCCGTCTATTTTGGGTGGGGAAGGGGACAAATGCAGTCCCTGTAAGAGGAATTTATGGTCCTCTAATTTCAGCCATTTCTGTTGATCCTGACTTTGATCCACCATCAGAAGGTGGAAATGCCATATCCGCTGGAGTGGTTGGAATTGTGGCTGCTGTGGTCTTGGTTATCATCTTGCTTCTAGGGGTCTTGTGGTGGAGAGGCAGCCGAAGAACGAAAAGCACACTTGAACAAGAGTTGAAGGATCTTGATCTCGGAACAGGATCATTTTCATTAAGACAAATCAAAGCTTCCACTAACAATTTTGATGTTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCGTTCTTGCTGATGGCAGTGTAATTGCAGTGAAGCAACTTTCTTCAAGGTCAAAGCAAGGAAATCGTGAATTTTTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAGATCAACTTTTGCTAATATACGAGTATCTGGAAAATAACAGTCTTGCTCGTGCCTTATTCGGACCTGAAGAATATCAACTGAAATTGGATTGGCCAACAAGGCAGAAGATTTGTGTTGGTATTGCTAAAGGTTTAGCATACCTTCACGACGAGTCAAGACTAAAGATCGTTCACCGTGACATCAAAGCTACCAATGTTCTTCTCGACAAAAATCTAAACCCGAAGATTTCCGACTTTGGTTTGGCTAGGCTAGATGACGAAGGAAATACACACATCAGCACACGGGTTGCCGGAACCTATGGATATATGGCACCAGAATACGCCATGCGAGGGTACTTAACTGACAAAGCAGACGTTTATAGTTTTGGTGTGGTAGCATTGGAAATAGTCGGTGGTCGAAGCAACACAAGTTTTGGAACCAAGGATGATTGCTTATATCTTCTTGATTATGCTAACGTTTTAAAAGAGAGAGGGAATTTACTAGACCTTGTCGATCCACGGTTAGGCTCTGAATTCAACAAGACAGAGGCAATGACGATGATCACTATCGCCCTTCAATGCACGAACATCAGTGCTGCAGACAGACCCTCCATGTCAACAGTAGTAGGCATGCTGGAAGGGAAGATTGGTGTAGAGGAGTTGGTTTCAGATCCAAATATCTCAAAGCAAGATGTGAATGCTATGTGGAGCCACATGTACCACCAGAAAGTGAAAACAATGGGCGAGAGCGAGATACAAAGTATGTTGACATGTGAGAGCGAGAGCGAGACCCAAAGTATGTTGATGGATGGACCATGGACTGATTCTTCAATTACTGATAGTGATTGCCTTCCCATCATGGCTGATGCTAGATACTTGGAGAATAGGATTTAG 3042 43.59 MFMARFLAVFLFFSLVSAVPQLPADEVEALKEVGKALGKADWNFTANPCGGLGSGWITNSLETGFVNNLTCNCTFQNNSVCHVTKIRLRSQNLPGILPPQLVRLPYLEELDLARNYISGPIPPEWGASKLVNISLLGNRLTGPIPKEIGNISTLVELILEVNQLSGSLPPELGKLTRLSRLLLSSNNFSGELPSSLGAITTLTDLRISDNHFTGSIPKYIQNWPNLGKLGIQASGLSGPIPSEIGLLTKLLDLRISDLNGGSSSFPPLNSLTKLKTLILRSCNIVGTLPDNLDGLENVQTLDFSFNKISGPIPAGFEALKKVDRIYLTGNLLTGAVPLWMLQEGENIDLSYNTFTETDFQALGCEARSLNLFASSSQDNTSGTVSCLAGTCDKTWYSLHINCGGKEDLINGTIRFDGDTNTGKSSLFFQGGANWGFSNTGSFMDDDRSTDDFIALSPPDLPMKNLGLYTNARISPISLTYYAYCMGNGNYTVSLHFAEIEFSNDKSYKSLGRRIFDVYVQRELVLKDFNIAEAAGGVGKPLVEKFTVSVTDGTIEIRLFWVGKGTNAVPVRGIYGPLISAISVDPDFDPPSEGGNAISAGVVGIVAAVVLVIILLLGVLWWRGSRRTKSTLEQELKDLDLGTGSFSLRQIKASTNNFDVANKIGEGGFGPVYKGVLADGSVIAVKQLSSRSKQGNREFLNEIGMISALQHPHLVKLYGCCIEGDQLLLIYEYLENNSLARALFGPEEYQLKLDWPTRQKICVGIAKGLAYLHDESRLKIVHRDIKATNVLLDKNLNPKISDFGLARLDDEGNTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGVVALEIVGGRSNTSFGTKDDCLYLLDYANVLKERGNLLDLVDPRLGSEFNKTEAMTMITIALQCTNISAADRPSMSTVVGMLEGKIGVEELVSDPNISKQDVNAMWSHMYHQKVKTMGESEIQSMLTCESESETQSMLMDGPWTDSSITDSDCLPIMADARYLENRI 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30107138 30121120 - CaPI482276_11g017570.1 Cam11g1757 140679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1757 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase 733 940 - -
Cam11g1757 1013 ProSiteProfiles Protein kinase domain profile. 657 938 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1757 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 943 IPR051824 -
Cam11g1757 1013 Gene3D Transferase(Phosphotransferase) domain 1 733 940 - -
Cam11g1757 1013 Gene3D Ribonuclease Inhibitor 40 191 IPR032675 -
Cam11g1757 1013 Gene3D Ribonuclease Inhibitor 192 263 IPR032675 -
Cam11g1757 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 23 259 - -
Cam11g1757 1013 Gene3D Phosphorylase Kinase; domain 1 621 732 - -
Cam11g1757 1013 Gene3D - 394 585 - -
Cam11g1757 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1757 1013 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515(InterPro)
Cam11g1757 1013 Gene3D Ribonuclease Inhibitor 264 390 IPR032675 -
Cam11g1757 1013 SUPERFAMILY Protein kinase-like (PK-like) 641 941 IPR011009 -
Cam11g1757 1013 SMART serkin_6 657 928 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1757 1013 SUPERFAMILY L domain-like 74 355 - -
Cam11g1757 1013 Pfam Protein tyrosine and serine/threonine kinase 659 926 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1757 1013 Pfam Malectin domain 397 581 IPR021720 -
Cam11g1757 1013 Pfam Leucine Rich Repeat 178 197 IPR001611 GO:0005515(InterPro)
Cam11g1757 1013 Pfam Leucine Rich Repeat 107 126 IPR001611 GO:0005515(InterPro)
Cam11g1757 1013 Pfam Leucine Rich Repeat 202 223 IPR001611 GO:0005515(InterPro)
Cam11g1757 1013 CDD STKc_IRAK 663 930 - -
Cam11g1757 1013 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 626 732 - -
Cam11g1757 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 395 586 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g1757 Cam-Chr11:30107138 Cam11g1759 Cam-Chr11:30146808 1.40E-210 dispersed
Cam11g1755 Cam-Chr11:30096990 Cam11g1757 Cam-Chr11:30107138 1.10E-97 proximal
Cam11g1756 Cam-Chr11:30098550 Cam11g1757 Cam-Chr11:30107138 7.70E-06 tandem
Cam11g1757 Cam-Chr11:30107138 Cam11g1758 Cam-Chr11:30122670 0.00E+00 tandem
Cam03g0705 Cam-Chr3:7920125 Cam11g1757 Cam-Chr11:30107138 1.30E-200 transposed
Cam07g1032 Cam-Chr7:24618773 Cam11g1757 Cam-Chr11:30107138 3.90E-213 transposed
Cam09g2251 Cam-Chr9:37075762 Cam11g1757 Cam-Chr11:30107138 1.00E-202 transposed
Cam09g2296 Cam-Chr9:37424461 Cam11g1757 Cam-Chr11:30107138 9.80E-140 transposed
Cam11g1757 Cam-Chr11:30107138 Cam07g0282 Cam-Chr7:3905758 3.90E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85599 PF07714 PK_Tyr_Ser-Thr 4.60E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1757 - - - 0.0