Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1758 ATGCTGTTGGCTCGATTACTCGCCGTCGTTTTTTTCTCATCTCTCTGCTTCGTAACCCTCACTTCCGGAGCCGCTCTGTTGCCGGCCGACGAAGTGGAAGCGTTGAAGGAGATCGGAAGGACATTGGGGAAGACGGGGTGGGATTTCACCGCCGATCCATGCGGCGGCGTTAGTAGCGGTTGGGTATCGAATTCCAAACAATTCGATAATAATTTTGCTAATAATGTCACGTGCGACTGCACGTTCCTAAATAATACCGTCTGTCACGTCACCATCATTGTTCTGAAGGCGCAGAGCCTTCAAGGTACTCTGCCTCCGCAACTAGTAAGGTTGCCTTTCCTGCAGGAACTTGATCTCACTCGCAACTATCTCAGCGGCCCGATTCCTCCAGAATGGGGTTCAACCAAGCTTCTCAAAATTTCCCTTCTTGGAAATCGATTGACGGGTCCAATCCCAAAAGAGATTGGAAACATCACCACTCTTACAGACTTGGTTTTGGAAATGAATCATTTTTCTGGAAGTATACCTCCAGAACTTGGAAATTTGACCAACTTATCAAGATTACTTCTTACCTCAAACAACTTTTCTGGGGAGCTCCCACCTTCCTTGGCAAGGATAACCTCATTGACGGACTTAGCTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCTGAAATTGGACTTTTGACAAAATTAACTGATGTGAGAATCAGCGACTTGAATGGAGGTTCATCGCCCTTTCCACCCCTTAATTCTTTGACAAAATTGAAAACCCTGATATTGAGGAGTTGCAATATAACTGGGATGCTACCCGACAATCTTGGTGGTTTGACATCATTGAAAATCTTAGACTTCAGCTTCAACAAAATTACTGGACCAATACCTGATAGCTTTGAAGCATTAAAAAAAGTGGATAGCATATATCTAACTGGAAACTTGCTAAACGGATCAGTGCCCATTTGGATGCTAGATCAAGGAGAAAGCATTGATCTCTCTTATAACAAATTTACTCAGAGAAACTCTCAGAACACTGGTTGTCAATCACGAAATTTAAACCTATTTGCAAGCTCTTCACAGGACAATAATTCTGGAGCAGTCTCATGTTTAGGCACTTGTCAAAAAACTTGGTACTCTGTCCATATAAACTGCGGAGGAAATGAAGAATTAATTAATGGAACAACCAAATTTGATGCTGACGCAAACACTGGAAGATCATCATTGTTTTTTCAAGGTGGAGCAAATTGGGGATTTAGTAATACTGGCAATTTTATGGACGATGATCGCTCAACAGACGATTTTATTGCATTAAACTCATCTACTCTCTCAATACCAAATCCTGAATTGTACATGAGGGCACGCATTTCTCCAATCTCTCTTACTTATTATGCATATTGCTTGGGTACTGGAAACTACACACTAAGCCTTCATTTTGCTGAGATAATGTTTACTAATGACAAAACATACAGTAGCCTTGGCAGACGCTTATTTGATGTTTACGTTCAGGGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGTATTGGCAAACCTTTTGTAAAGAAATTCAAAGTTTCAGTGACTAATGGTACTATAGAGATCCGCCTATTTTGGGCTGGAAAGGGGTCAAATGCAATCCCTGTGAGAGGAGTTTATGGTCCTTTAATTTCCGCCATTTCTGTTGATCCTGACTTTACGCCACCATCAGAAGGTGGAAATGCCATATCTGCCGGTGCAGTGGTTGGAATTGTGGTTGCTGTGGTCTTTGTTATCATCTTGGTTCTTGGAGTGTTGTGGTGGAGAGGCTGCCTAAGAAAGACAAGCACACTTGAACAAGAGTTGAAGGGTCTAGATCTAGGAACAGGTTCATTTTCATTAAGACAAATCAGAGCTGCTACTAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGTATTCTTGCAGATGGCACCGTAATTGCAGTGAAACAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTAATATATGAGTATTTGGAAAACAACAGCCTTGCTCGGGCCTTATTCGGACCTGAAGAATGCCAACTGAAATTGGATTGGCCAACTAGGCAAAAGATTTGTGTTGGTATAGCTAGAGGTTTAGCATACCTTCATGAGGAGTCAAGACTTAAGATCGTTCACCGAGATATCAAAGCTACCAATGTTCTACTCGATAAAAATCTCAACCCCAAGATTTCCGACTTCGGTTTGGCAAAGCTGGATGAAGAAGAAAATACACATATCAGCACCCGGGTTGCCGGAACCTATGGGTATATGGCACCAGAATATGCCATGCGAGGCTACTTAACTGACAAGGCAGATGTGTACAGCTTTGGTATTGTGGGGTTGGAGATAGTCAGTGGTCGAAGCAACACAAGTTTCCGGACCAAGGACGATTGCTTTTACCTTCTTGACCATGCTAATACTTTAAAAGAGAAAGACCGTTTATTAGAGCTTGTTGATCCACGGTTAGGCTCTGATTTCAACAAGAGAGAGGCAATGACGATGATCAACATTGCTCTCCAATGTACAAACGTCGTTGCTGGTGACAGGCCTGCCATGTCATCAGTGGTGAGCATGCTGGAGGGGAAGGTTGTTGTGAAGGAGGTGGTTTCAGATCCCAGTGTCTCAAAACAAGATGTGAATGCAATGTGGAGCCAGATTTATCGCCAGAAAGGGGAAACAACGAGTGTAAGCCAGACGCAAAGTTTGACTATGGATGGACCATGGAGTGGTTCTTCAACAACTGCCAGTGATCTCTATCCCATCAACATGGATTCTAAATACTTGGAGAATAGGAACTAG 2955 42.64 MLLARLLAVVFFSSLCFVTLTSGAALLPADEVEALKEIGRTLGKTGWDFTADPCGGVSSGWVSNSKQFDNNFANNVTCDCTFLNNTVCHVTIIVLKAQSLQGTLPPQLVRLPFLQELDLTRNYLSGPIPPEWGSTKLLKISLLGNRLTGPIPKEIGNITTLTDLVLEMNHFSGSIPPELGNLTNLSRLLLTSNNFSGELPPSLARITSLTDLAIQASGLSGPIPSEIGLLTKLTDVRISDLNGGSSPFPPLNSLTKLKTLILRSCNITGMLPDNLGGLTSLKILDFSFNKITGPIPDSFEALKKVDSIYLTGNLLNGSVPIWMLDQGESIDLSYNKFTQRNSQNTGCQSRNLNLFASSSQDNNSGAVSCLGTCQKTWYSVHINCGGNEELINGTTKFDADANTGRSSLFFQGGANWGFSNTGNFMDDDRSTDDFIALNSSTLSIPNPELYMRARISPISLTYYAYCLGTGNYTLSLHFAEIMFTNDKTYSSLGRRLFDVYVQGKLELKDFNIADAAGGIGKPFVKKFKVSVTNGTIEIRLFWAGKGSNAIPVRGVYGPLISAISVDPDFTPPSEGGNAISAGAVVGIVVAVVFVIILVLGVLWWRGCLRKTSTLEQELKGLDLGTGSFSLRQIRAATNNFDAANKIGEGGFGPVYKGILADGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEECQLKLDWPTRQKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGIVGLEIVSGRSNTSFRTKDDCFYLLDHANTLKEKDRLLELVDPRLGSDFNKREAMTMINIALQCTNVVAGDRPAMSSVVSMLEGKVVVKEVVSDPSVSKQDVNAMWSQIYRQKGETTSVSQTQSLTMDGPWSGSSTTASDLYPINMDSKYLENRN 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30122670 30134348 - CaPI482276_11g017580.1 Cam11g1758 140680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1758 984 FunFam Putative LRR receptor-like serine/threonine-protein kinase 716 923 - -
Cam11g1758 984 Gene3D Phosphorylase Kinase; domain 1 607 715 - -
Cam11g1758 984 MobiDBLite consensus disorder prediction 946 967 - -
Cam11g1758 984 SUPERFAMILY Protein kinase-like (PK-like) 624 935 IPR011009 -
Cam11g1758 984 Pfam Protein tyrosine and serine/threonine kinase 643 910 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1758 984 SUPERFAMILY L domain-like 77 338 - -
Cam11g1758 984 Pfam Leucine rich repeat 256 315 IPR001611 GO:0005515(InterPro)
Cam11g1758 984 Gene3D Ribonuclease Inhibitor 241 356 IPR032675 -
Cam11g1758 984 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 609 715 - -
Cam11g1758 984 Pfam Malectin domain 379 563 IPR021720 -
Cam11g1758 984 SMART serkin_6 640 911 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1758 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1758 984 CDD STKc_IRAK 646 911 - -
Cam11g1758 984 Pfam Leucine Rich Repeat 184 204 IPR001611 GO:0005515(InterPro)
Cam11g1758 984 Pfam Leucine Rich Repeat 114 133 IPR001611 GO:0005515(InterPro)
Cam11g1758 984 Pfam Leucine Rich Repeat 161 182 IPR001611 GO:0005515(InterPro)
Cam11g1758 984 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 377 568 - -
Cam11g1758 984 Gene3D - 376 567 - -
Cam11g1758 984 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 199 - -
Cam11g1758 984 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 927 IPR051824 -
Cam11g1758 984 Gene3D Ribonuclease Inhibitor 28 240 IPR032675 -
Cam11g1758 984 ProSiteProfiles Protein kinase domain profile. 640 891 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1758 984 Gene3D Transferase(Phosphotransferase) domain 1 716 929 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0705 Cam-Chr3:7920125 Cam11g1758 Cam-Chr11:30122670 4.70E-198 dispersed
Cam09g2251 Cam-Chr9:37075762 Cam11g1758 Cam-Chr11:30122670 3.30E-209 dispersed
Cam11g1755 Cam-Chr11:30096990 Cam11g1758 Cam-Chr11:30122670 7.60E-102 dispersed
Cam11g1758 Cam-Chr11:30122670 Cam11g1760 Cam-Chr11:30158531 2.70E-203 dispersed
Cam11g1757 Cam-Chr11:30107138 Cam11g1758 Cam-Chr11:30122670 0.00E+00 tandem
Cam11g1758 Cam-Chr11:30122670 Cam11g1759 Cam-Chr11:30146808 1.70E-202 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85600 PF07714 PK_Tyr_Ser-Thr 7.90E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1758 - - - 0.0