Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1759 ATGGTCGGAACTTGGGACATGGATTTGGCTGTTCTTGTTTATGGCTTCCTGCTTTTGAACTGCTTCTTGGAATTTGGATCCCATGCCCAACCTCTGCCTGATCAAGAAGTGAGAGCCCTTCAAGCAATATCTGCAGAGCTAAGGAACTTAAACTGGAATGTTCACCAAAATTCTTGCATTAATGGTGATGGATTTTTCAATAGACCAATCCTTGGTACAGATATTATCAGAGAGGTTAATTGCACTTGCACCACTGTTTGCAGTGTCACTACCATCCGGCTAAAGGGTTTGAATCTAACTGGAACTCTGCCAGCAGCATTTGGAAATCTAACAAAGCTGCAAACAATAGATCTTACTCGCAATTTAATTTCTGGATCGATCCCAAGAGAGTTCGCACAGATTCCTCTTGTTGATTTGTCCATGTTGGGAAATCGTCTCAGTGGTGAAATTCCTCCAGAAATTGGTGACATTGCTACACTTGAACATTTGGTTTTGGAAGACAATCTCCTTGGAGGGAATCTTCCCGAAAGCCTCGGGCGACTGAGCCGCTTGCGAAGATTACTTCTTTCTGCAAATAATTTCAATGGAACAATTCCAGCATCGTATGGAAACTTGAAGAACTTGACTGATTTTCGGATAGATGGAAATGATGTATCAGGAAGACTTCCTGAATTTATTGGCAATTGGACCAAACTAGAGAGACTGGATATTCAAGGAACTTCTATGGAGACCCCAATTCCTAGTGGCATATCTGACTTGAAAAACTTAACCCAATTGAGGATAACTGATTTGAAGGGACTGCCAACAAGTTTTCCTAATTTGACTCAATTGACATCTTTAGAAGAACTGATCCTAAGAAATTGCTTAATCCAGGATCAGATTCCTGGGTATATTGGATTGTTTAGTAATTTGAAAACTTTAGATCTAAGCTTCAATGAATTGAGTGGTCCAATTCCAAATACATTTCAGAATCTAGACAGAGTTACTCGGTTCATGTTTTTGACAAACAACTCATTAAGTGGCCAAGTACCAAGCTGGATCTTGAACAGTGAAAGGAGCATAGATTTATCTTACAACAATTTTACTGGGTCCCCTGTTTCAAGTTGTCAACAGTCTGATGTGAACTTGGTTTCAAGTTATTCAACTACAATGAATAACACTGTTGCTTGGTGCTTGAGGAAGGATCTCCCTTGCCCAAGAGAAACGCGATTTCATTCCTTGTTCATAAATTGTGGAGGACAAAGGATGGAGGTTGATGGTAATGAATATGAAGAGGATGCAACTCCAGGTGGCAAATCCAATTTCATTTCTTTCTCTGATAGATGGGCTTATAGCAGTACTGGTGTTTTCCTGGGAGATGAGAATGCTAATTACAGAGAAACAAGTAGCAATGCATCTATTTCGAGCATCTACCGAACCGCTCGACTCGCACCTCTTTCGCTCAAGTACTATGGACTTTGTTTAAGAAGAGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTATACTTCTGACCAAACATTCAGCAGCTTGGGAGAGCGCATATTTGATATCTCAATTCAAGGAAATTTGGTTCAAAAAGATTTTAACATAATGGAGAAAGCTGGTGGTGTTGGGAAGAGCTTTATTCTAGAAGAGCCTAATATTTTGGTCAATGGAAGTACTCTTGAGATACACTTATATTGGGCTGGTAAAGGAACTACTGCCATTCCAGACAGAGGGGTGTATGGACCTTTGATATCTGGGATCACAGTCACACCAAACTTTGATGTGGAGACTGGAGGGCTATCAGCTGGAGCTATTGCTGGCATTGTTGTTGGTAGTTTTGTGTTTGTTGTGTTGGTATTGGCTGTTCTTAGATGGAAAGGTTATTTGGGTGGAAAGGACACTGAAGACAGTGAATTGAAGGCCCTAGATTTACAGACAGGTTATTTCAGTTTGAGACAAATCAAAACAGCCACCAACAATTTCGACCCGACCTATAAAATAGGCGAGGGAGGTTTTGGTCCTGTCTACAAGGGTGTATTGTCCGATGGTACTTCGATAGCGGTAAAGCAACTATCCTCTAAATCAAGACAAGGAAACCGTGAATTCGTTACTGAGATCGGCATGATATCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAACCAATTATTGCTTGTTTATGAGTATCTAGAGAATAACAGTCTTGCCCGTGCTCTTTTTGGCGCGGAGGAGCACCGACTACACTTGGATTGGCCGATAAGAATGAAGATATGCTTGGGAATAGCAAAGGGATTGGCTTACCTTCATGAAGAATCTGTATTGAAAATTGTTCATAGAGATATAAAAGCTACCAATGTTTTACTTGATAAAAACCTGAATGCCAAGATTTCTGACTTTGGATTGGCTAGGCTTGATGAAGAAGAGAACACCCATATCAGCACAAGAATTGCTGGCACAATTGGTTACATGGCTCCTGAGTATGCAATGCGAGGCTACTTAACCGATAAAGCAGATGTTTATAGCTTCGGAGTTGTGGCTTTAGAGATTGTTAGTGGAAAAAGTAACACAAACTACAGGCCAAAAGAGGAATTTGTTTATCTTCTCGACTGGGCTTATGTTCTACAAGAGCAAGGAAACCTTCTCGAACTCGTTGATCCGAGTCTCGGCTCACATTACTCAAAAGAAGAGGTGATGAGGATGATTCATATAGCTCTGTTATGCACAAATCCATCTCCAACTCTTAGGCCATCTATGTCTTCAGTGGTTAGCATGCTTGAAGGAAAAATTGCGGTCCAAGCGCCGATCATAAAGCGCGGTGCAGTCGATCAAGATGCAAGGTTCAAAGCCTTTGAAAGACTGTCACAAGATAGCATAACAAGCATTTCAACATCATCACAAGGCATTCCAATGCAAAAAAGCATGTTGATTGATGGGCCCTGGATTGATTCCACTACTTCTTCTCATAACAAGGATGAAACTCAAGATTATTCTTCAACCACAAATCTCCTTTAG 3027 40.6 MVGTWDMDLAVLVYGFLLLNCFLEFGSHAQPLPDQEVRALQAISAELRNLNWNVHQNSCINGDGFFNRPILGTDIIREVNCTCTTVCSVTTIRLKGLNLTGTLPAAFGNLTKLQTIDLTRNLISGSIPREFAQIPLVDLSMLGNRLSGEIPPEIGDIATLEHLVLEDNLLGGNLPESLGRLSRLRRLLLSANNFNGTIPASYGNLKNLTDFRIDGNDVSGRLPEFIGNWTKLERLDIQGTSMETPIPSGISDLKNLTQLRITDLKGLPTSFPNLTQLTSLEELILRNCLIQDQIPGYIGLFSNLKTLDLSFNELSGPIPNTFQNLDRVTRFMFLTNNSLSGQVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNNTVAWCLRKDLPCPRETRFHSLFINCGGQRMEVDGNEYEEDATPGGKSNFISFSDRWAYSSTGVFLGDENANYRETSSNASISSIYRTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTSDQTFSSLGERIFDISIQGNLVQKDFNIMEKAGGVGKSFILEEPNILVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVETGGLSAGAIAGIVVGSFVFVVLVLAVLRWKGYLGGKDTEDSELKALDLQTGYFSLRQIKTATNNFDPTYKIGEGGFGPVYKGVLSDGTSIAVKQLSSKSRQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGAEEHRLHLDWPIRMKICLGIAKGLAYLHEESVLKIVHRDIKATNVLLDKNLNAKISDFGLARLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSHYSKEEVMRMIHIALLCTNPSPTLRPSMSSVVSMLEGKIAVQAPIIKRGAVDQDARFKAFERLSQDSITSISTSSQGIPMQKSMLIDGPWIDSTTSSHNKDETQDYSSTTNLL 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30146808 30155846 + CaPI482276_11g017590.1 Cam11g1759 140681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1759 1008 Pfam Protein tyrosine and serine/threonine kinase 664 929 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1759 1008 SUPERFAMILY Protein kinase-like (PK-like) 643 936 IPR011009 -
Cam11g1759 1008 Gene3D Ribonuclease Inhibitor 73 263 IPR032675 -
Cam11g1759 1008 Gene3D Phosphorylase Kinase; domain 1 628 734 - -
Cam11g1759 1008 SUPERFAMILY RNI-like 92 364 - -
Cam11g1759 1008 MobiDBLite consensus disorder prediction 984 1008 - -
Cam11g1759 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 198 265 - -
Cam11g1759 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 735 942 - -
Cam11g1759 1008 CDD STKc_IRAK 665 932 - -
Cam11g1759 1008 Gene3D - 405 590 - -
Cam11g1759 1008 Pfam Leucine Rich Repeat 303 325 IPR001611 GO:0005515(InterPro)
Cam11g1759 1008 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515(InterPro)
Cam11g1759 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 628 734 - -
Cam11g1759 1008 ProSiteProfiles Protein kinase domain profile. 659 941 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1759 1008 Pfam Malectin domain 407 585 IPR021720 -
Cam11g1759 1008 SMART serkin_6 659 930 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1759 1008 Gene3D Ribonuclease Inhibitor 264 381 IPR032675 -
Cam11g1759 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1759 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 590 - -
Cam11g1759 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 955 IPR051824 -
Cam11g1759 1008 Gene3D Transferase(Phosphotransferase) domain 1 735 943 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1032 Cam-Chr7:24618773 Cam11g1759 Cam-Chr11:30146808 0.00E+00 dispersed
Cam09g2296 Cam-Chr9:37424461 Cam11g1759 Cam-Chr11:30146808 4.00E-149 dispersed
Cam10g2162 Cam-Chr10:35118581 Cam11g1759 Cam-Chr11:30146808 4.60E-92 dispersed
Cam11g0368 Cam-Chr11:5171577 Cam11g1759 Cam-Chr11:30146808 7.00E-67 dispersed
Cam11g1757 Cam-Chr11:30107138 Cam11g1759 Cam-Chr11:30146808 1.40E-210 dispersed
Cam11g1759 Cam-Chr11:30146808 Cam11g0309 Cam-Chr11:4618815 1.90E-71 dispersed
Cam11g1758 Cam-Chr11:30122670 Cam11g1759 Cam-Chr11:30146808 1.70E-202 tandem
Cam11g1759 Cam-Chr11:30146808 Cam11g1760 Cam-Chr11:30158531 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85601 PF07714 PK_Tyr_Ser-Thr 8.80E-50 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1759 - - - 0.0