Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1800 ATGTTTTGCTTGGCAATTGAATTTGAGGAAGAGCTGAGGAGCTGTCCACAATTCGACCGCTCCAAAGTCCGTCGTCTTCCCCGGCTCCGGTCGACCGTCGGAGTGTACACTGAACATTATCCACTCACTTCCGTTCATTTCAGTTCAATGTTTCTGAGAGCTCCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCATCCTCTGGTTCCGTTGTCTCTCTCTTCCTCAATTTGTTCTTCTTCTCGCACACCTTTCGCCATCCGATGCCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCATCTCCCTCTGAATACCCCGATGTGGCGGATAATCGTTGGCGGCCCACGTGTTTGTATTTCACACAGGGCAAGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGAAATTGCTAGGTCAAACCATATGCGAACTCAGGACATTGATTTTTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAAAGGATAAATGAATACATTGAAGGAAAATACGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATTCAACAGTTCGAAGATTGGCTGGTTCATCATCAGCTATGGAGGAAGGAACTGGGTGGTGTTCTTGATCGAGCAGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAGCGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTCAACTTTTACCAAAAGAAGGCAACGGGAATGGTGACGATGATGAGACAACTTGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGATACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGATGGTGCACATTTGCAGATCACTGCACGTAGGAATCCCAAATCTCAACATGTTAAGTTTCTTTTTGAGAACCTTTGTGACAAATGGAAGTTGAATACAAATGCTTCTCGGTGCCCCTCTTGCCAAGTTGAAGGGCTGGGATGGGTGATATGTGACCATCTTGGATGTGTTCTTCAAGCAAGTATGAAGGCTATTAATCATCGTTATGAGATTAAGTTTTTGGAAGTCATGGTTGTTTTTGAAGTGTTGTCTCAGAAGCTGAAACCCCATGGTTCAAACCATTCAAGGTCCTCTACTGTTCCGAAATCCGAAGCTTCATCAAAAACCCTTTTAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATTCTCATTCCGGTGAATGATGATTTTAGTGTTACAGATGAAGTAGCCATGGATTGTGAAATGGTTGGCGTGGGTCAAGGTAACAAAAGTGCCCTTGGACGAGTTACACTGGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTATGCCCTATAGAGCGCGTGGTTGACTTTCGGACTCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGCTAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGCATTGCTCTTGAGTCATCCCAAGAAGGATGTGAGAGACACCTCCGAGTACCAATTCTTTCAGAAGGAAGGAAGTAAAAGAGCTCTCCGCCATCTTGCCGCCGAGTTTCTTGGTGTTGAGATCCAAAACGGGGAGCACTGTCCTGTAGAAGATGCTCGTTCTGCAATGCTGCTGTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTCAAAGCTGAAATAAAGCTTAAATTGAAGCAAAAGAAACGCAGGCCAAGGAAGAAATCCAAGGATGGAAGTGGTTTTGAATGA 2025 43.65 MFCLAIEFEEELRSCPQFDRSKVRRLPRLRSTVGVYTEHYPLTSVHFSSMFLRAPLLKLSSFYSIPCHPLVPLSLSSSICSSSRTPFAIRCHSSLPTAHEPSSSSPSEYPDVADNRWRPTCLYFTQGKCTMMDDPLHIKKFNHDISRELQVEIARSNHMRTQDIDFFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVHHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYQKKATGMVTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPKSQHVKFLFENLCDKWKLNTNASRCPSCQVEGLGWVICDHLGCVLQASMKAINHRYEIKFLEVMVVFEVLSQKLKPHGSNHSRSSTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSVTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVCPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEIKLKLKQKKRRPRKKSKDGSGFE 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30520113 30529786 - CaPI482276_11g018000.1 Cam11g1800 140722

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1800 674 MobiDBLite consensus disorder prediction 655 674 - -
Cam11g1800 674 MobiDBLite consensus disorder prediction 435 472 - -
Cam11g1800 674 Pfam Exonuclease 490 636 IPR013520 -
Cam11g1800 674 Pfam Exonuclease 170 342 IPR013520 -
Cam11g1800 674 MobiDBLite consensus disorder prediction 455 470 - -
Cam11g1800 674 CDD ERI-1_3'hExo_like 167 345 IPR047201 GO:0000175(InterPro)
Cam11g1800 674 Gene3D - 154 381 IPR036397 GO:0003676(InterPro)
Cam11g1800 674 SUPERFAMILY Ribonuclease H-like 163 354 IPR012337 -
Cam11g1800 674 MobiDBLite consensus disorder prediction 435 453 - -
Cam11g1800 674 Gene3D - 486 664 IPR036397 GO:0003676(InterPro)
Cam11g1800 674 SMART exoiiiendus 488 646 IPR013520 -
Cam11g1800 674 CDD REX4_like 490 638 IPR037431 GO:0006364(InterPro)|GO:0008408(InterPro)
Cam11g1800 674 PANTHER 3'-5' EXONUCLEASE ERI1-RELATED 104 370 IPR051274 GO:0000175(PANTHER)|GO:0000467(PANTHER)
Cam11g1800 674 FunFam Interferon-stimulated exonuclease gene 20 485 656 - -
Cam11g1800 674 SUPERFAMILY Ribonuclease H-like 480 641 IPR012337 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1800 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g171 . . . . . . . . . . . Cma09g00836 . Car09g00751 Sed05g2541 Cpe06g00667 . Bhi09g03472 Tan01g4356 Cmetu07g0939 . Hepe01g1415 Mch11g1036 . Cla11g01731 Cam11g1800 Cec11g1821 Cco11g1827 Clacu11g1959 Cmu11g1769 Cre11g2177 . . Cone14ag1048 . Lsi04g02040 Csa04g02310 Chy07g00046 Cme07g00564 . . . . . . . . . . Cmo09g00831 . . . . . . . . . . . . . . . . . . . . . . . .