Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1818 | ATGAGGAAAGAATACGACGAAAAAGGAAAAAGAGTGAAAGAGAGAAAGAGAGAGAGAGAGAGAGAGATTAGATTTGGACGAAAGTGGAAGAAAAGGAAAAGAGAAGCTGTTCCTTCGATTGATTCAACACGTCCTCCTCTTCGGGATTGCACAAAACGCGGCCTTCGTCTTGTGGCGTTGACGATTCATTTAACCCCTGCCAATTCCCCCCCCAACAATCCTTCTTCTTCTTCTATTAACAGTACACCGACACTTCTTCTTCTTTTTCATCAATCCTTTCCTCCTCTCTCATTTCTCCAATTTTCCAACAAACCCATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCAGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCGCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGACGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACTTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA | 1167 | 42.59 | MRKEYDEKGKRVKERKREREREIRFGRKWKKRKREAVPSIDSTRPPLRDCTKRGLRLVALTIHLTPANSPPNNPSSSSINSTPTLLLLFHQSFPPLSFLQFSNKPMTGKEILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH | 388 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30703321 | 30706132 | + | CaPI482276_11g018180.1 | Cam11g1818 | 140740 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1818 | 388 | ProSiteProfiles | PPM-type phosphatase domain profile. | 140 | 387 | IPR001932 | - | |
Cam11g1818 | 388 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cam11g1818 | 388 | SMART | PP2C_4 | 136 | 385 | IPR001932 | - | |
Cam11g1818 | 388 | Gene3D | - | 135 | 388 | IPR036457 | - | |
Cam11g1818 | 388 | PANTHER | PROTEIN PHOSPHATASE | 118 | 385 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cam11g1818 | 388 | SUPERFAMILY | PP2C-like | 136 | 388 | IPR036457 | - | |
Cam11g1818 | 388 | FunFam | Probable protein phosphatase 2C 39 | 130 | 388 | - | - | |
Cam11g1818 | 388 | CDD | PP2Cc | 148 | 387 | IPR001932 | - | |
Cam11g1818 | 388 | Pfam | Protein phosphatase 2C | 152 | 380 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam11g0973 | Cam-Chr11:16193590 | Cam11g1818 | Cam-Chr11:30703321 | 1.20E-17 | dispersed | |
Cam11g1437 | Cam-Chr11:27092904 | Cam11g1818 | Cam-Chr11:30703321 | 3.50E-88 | dispersed | |
Cam10g0905 | Cam-Chr10:20267856 | Cam11g1818 | Cam-Chr11:30703321 | 9.40E-85 | transposed | |
Cam11g1818 | Cam-Chr11:30703321 | Cam07g0248 | Cam-Chr7:3602918 | 3.40E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1818 | K17506 | - | csv:101215129 | 535.798 |