Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1818 ATGAGGAAAGAATACGACGAAAAAGGAAAAAGAGTGAAAGAGAGAAAGAGAGAGAGAGAGAGAGAGATTAGATTTGGACGAAAGTGGAAGAAAAGGAAAAGAGAAGCTGTTCCTTCGATTGATTCAACACGTCCTCCTCTTCGGGATTGCACAAAACGCGGCCTTCGTCTTGTGGCGTTGACGATTCATTTAACCCCTGCCAATTCCCCCCCCAACAATCCTTCTTCTTCTTCTATTAACAGTACACCGACACTTCTTCTTCTTTTTCATCAATCCTTTCCTCCTCTCTCATTTCTCCAATTTTCCAACAAACCCATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCAGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCGCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGACGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACTTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA 1167 42.59 MRKEYDEKGKRVKERKREREREIRFGRKWKKRKREAVPSIDSTRPPLRDCTKRGLRLVALTIHLTPANSPPNNPSSSSINSTPTLLLLFHQSFPPLSFLQFSNKPMTGKEILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30703321 30706132 + CaPI482276_11g018180.1 Cam11g1818 140740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1818 388 ProSiteProfiles PPM-type phosphatase domain profile. 140 387 IPR001932 -
Cam11g1818 388 MobiDBLite consensus disorder prediction 1 20 - -
Cam11g1818 388 SMART PP2C_4 136 385 IPR001932 -
Cam11g1818 388 Gene3D - 135 388 IPR036457 -
Cam11g1818 388 PANTHER PROTEIN PHOSPHATASE 118 385 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam11g1818 388 SUPERFAMILY PP2C-like 136 388 IPR036457 -
Cam11g1818 388 FunFam Probable protein phosphatase 2C 39 130 388 - -
Cam11g1818 388 CDD PP2Cc 148 387 IPR001932 -
Cam11g1818 388 Pfam Protein phosphatase 2C 152 380 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g0973 Cam-Chr11:16193590 Cam11g1818 Cam-Chr11:30703321 1.20E-17 dispersed
Cam11g1437 Cam-Chr11:27092904 Cam11g1818 Cam-Chr11:30703321 3.50E-88 dispersed
Cam10g0905 Cam-Chr10:20267856 Cam11g1818 Cam-Chr11:30703321 9.40E-85 transposed
Cam11g1818 Cam-Chr11:30703321 Cam07g0248 Cam-Chr7:3602918 3.40E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1818 K17506 - csv:101215129 535.798