Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1891 ATGAGCTGTTTTTCTTGCATTCGTGCTCGTTGTAAAGACGCCAGCAAGGTCGAAATTGACAATGGGAGTGGAAGGGGGAAGTCGTATGCAAATGAAACTGGAAAGGGGAAGGAATCGCAAACAAGAAGTGGAAACAACCGGAAATGTGGAGCTGCACGAAGCTTCCCATTTCGTGAATTGGCGACGGCTACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAAACAGGCCAGGTTGTTGCGATCAAACAACTCAATCATGATGGTCTTCAGGGATATCAAGAATTCATTGTCGAAGTTCTTATGTTAAGTTTATTGCATCACTGTAATCTTGTCACTTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTATGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGTTTGTCGCCTGAACGGCCACCATTGAGTTGGAACACTAGAATCAAGATTGCTCTTGGTGCAGCCCAGGGCCTTGAGTATCTTCACTGCACAGCCAATCCGCCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTGGATGATGACTTCAATCCAAAGCTCTCAGATTTTGGACTGGCAAAATTAGGACCGGTTGGTGACAACACTCATGTTTCCACCAGAGTTATGGGAACGTATGGCTATTGTGCTCCGGAGTATGCCATGAGTGGCAAACTGACCCTTAAATCTGATATTTATTGCTTTGGTGTAGTTCTCTTGGAGCTAATTACAGGTAGGAAAGCTATCGACTCCACCAAGAAACCTGGAGAGCAAAATCTGGTTGCTTGGTCTCGCCCTTTTCTAAAAGACCGGAGGAAGTTCATTCAATTAGTCGACCCACTGCTGGAAGGGCGCTACCCTCTTCGTTGTCTACACCATGCAATCGCAATTGCTGCAATGTGTCTCCAGGAGCAACCAACATTCCGGCCAATTATCAGTGATATCGTTGTGGCCCTTGAGTACTTAGCTTCTCAGAGTTACTTATCAGAACAACCGAGGGACGGCATGCCTAGTCCGTCCAAGCTATCTCCTCAAGGGGACAGGAGTACCCGTCTCTGTAAGGTGCATTTGCTGGCGTTAGCAAAACCCGACCAACTCCAATCTCCTGTTTAA 1176 45.66 MSCFSCIRARCKDASKVEIDNGSGRGKSYANETGKGKESQTRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQVVAIKQLNHDGLQGYQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFIQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLASQSYLSEQPRDGMPSPSKLSPQGDRSTRLCKVHLLALAKPDQLQSPV 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31474564 31477187 - CaPI482276_11g018910.1 Cam11g1891 140813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1891 391 Gene3D Transferase(Phosphotransferase) domain 1 143 356 - -
Cam11g1891 391 CDD STKc_IRAK 73 341 - -
Cam11g1891 391 MobiDBLite consensus disorder prediction 33 48 - -
Cam11g1891 391 PANTHER OS07G0668900 PROTEIN 33 355 - -
Cam11g1891 391 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1891 391 PIRSF ILK 25 355 - -
Cam11g1891 391 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524(InterPro)
Cam11g1891 391 MobiDBLite consensus disorder prediction 350 369 - -
Cam11g1891 391 FunFam Serine/threonine-protein kinase PBS1 143 356 - -
Cam11g1891 391 FunFam probable serine/threonine-protein kinase RLCKVII 37 142 - -
Cam11g1891 391 Gene3D Phosphorylase Kinase; domain 1 37 142 - -
Cam11g1891 391 ProSiteProfiles Protein kinase domain profile. 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1891 391 SMART serkin_6 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1891 391 MobiDBLite consensus disorder prediction 22 50 - -
Cam11g1891 391 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
Cam11g1891 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1891 391 MobiDBLite consensus disorder prediction 350 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g1358 Cam-Chr10:27104989 Cam11g1891 Cam-Chr11:31474564 3.80E-75 dispersed
Cam10g2032 Cam-Chr10:34163794 Cam11g1891 Cam-Chr11:31474564 2.60E-125 dispersed
Cam11g0552 Cam-Chr11:6992725 Cam11g1891 Cam-Chr11:31474564 1.60E-78 dispersed
Cam11g1148 Cam-Chr11:22539145 Cam11g1891 Cam-Chr11:31474564 1.20E-82 dispersed
Cam11g1891 Cam-Chr11:31474564 Cam08g1389 Cam-Chr8:20176700 3.10E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85605 PF00069 Pkinase 4.30E-45 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1891 - - - 0.0