Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1897 ATGATGGAGTGGCAGAACCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTCGAGCAATTGAGCAACGCCGATGGAGTTAATGGCCTCTATGTCAAGGTGATGACCGATGAGCAAATGGAGCTTCTCAGGCAGCAGATCTCTGTCTATGCTTCCATATGTGAGCAGCTTGTCGAGATGCACAAGGCAATCACTGCCCAGCAGGACCTTGCGGGAATGAGGCTTGGGAATCTTTACTGTGATCCAATAATGGCGTCTGCTGCTGGTCACAAGATAACTGCTAGGCAGAGGTGGACGCCTACGCCTGTGCAGCTTCAAATTCTTGAGCAGATATTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGATATAACTCTACAGCTGACACAGCATGGTCAAATTTCAGAAGCAAACGTTTATAATTGGTTTCAAAACAGAAGGGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCAAATAATGCAGACTCAGAACCAGAGACAGAAGTTGATTCTCCAAAGGAGAAAAAGACTAAACCAGAAACCTTCCAAACTTATGAACATTTCGTTCCGAAGTCAGGCAACATGTACTCTCAGAGAACTGATTTCGGTACTGAAATACTTTCCTTTGATGCACAGTCGAATAAAGGGGAGCCCATGTTTCAGTCATTCGGATCTGGTCATATCAGTCAGATGAATCCATTACAGAATCATAGAAATAATCTGTCAAATGATAAAATGAACGTAGCGGATTACTCTCCTTACACTCCTTGTGAAGGATATCACTTGGCCGAGTGA 819 44.2 MMEWQNQQQQNQTEQLQMQMQVEQLSNADGVNGLYVKVMTDEQMELLRQQISVYASICEQLVEMHKAITAQQDLAGMRLGNLYCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKDITLQLTQHGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQTYEHFVPKSGNMYSQRTDFGTEILSFDAQSNKGEPMFQSFGSGHISQMNPLQNHRNNLSNDKMNVADYSPYTPCEGYHLAE 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31501734 31503120 + CaPI482276_11g018970.1 Cam11g1897 140819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1897 272 Gene3D - 101 165 - -
Cam11g1897 272 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 250 IPR044559 GO:0003700(InterPro)
Cam11g1897 272 CDD homeodomain 99 161 IPR001356 GO:0003677(InterPro)
Cam11g1897 272 SUPERFAMILY Homeodomain-like 98 161 IPR009057 -
Cam11g1897 272 MobiDBLite consensus disorder prediction 174 190 - -
Cam11g1897 272 MobiDBLite consensus disorder prediction 157 192 - -
Cam11g1897 272 ProSiteProfiles 'Homeobox' domain profile. 95 160 IPR001356 GO:0003677(InterPro)
Cam11g1897 272 SMART HOX_1 97 164 IPR001356 GO:0003677(InterPro)
Cam11g1897 272 Pfam Homeodomain 99 159 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0030 Cam-Chr10:1951699 Cam11g1897 Cam-Chr11:31501734 1.70E-73 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52957 PF00046 Homeodomain 8.60E-18 CL0123 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1897 - - - 0.0