Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1902 | ATGGCTACGGGTATAGATTTTTCACCTCCCTTCACTCTACTGGAAGGCGGCGGATACAATAAGGACAATGTATCAGCCACAGATGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGAGCAGTGGGAAGCCTCCCCGACACCTCTCAGTAATGCGTCATAGTCTGAGCTCCATAAAGCTCCTTGGCCAAGCTGATTTAAGCTTGGATGCTGAAACTCTTGGGAATAAGTCACCTGATGGAAAAGCGGGATACTTACCTGTCTTTAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAACAGTACATGGAAGACGAGCACATATGCATAGATGATCTTGTTGAACATGTCCATGCTTGTGCAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGACGCTGCTGCTTTTGTTAGAAAGAACATCCTCAGATTCATAGTCGAGGACTCCTGTTTTCCAATTAGTGTGGAGAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTATGCTTTTGCTGATGCTAGTTCTCTGGATATCTCCTCTGGCACAACTGCCCTGACTGCTTTCATTTTTGGAAGAACAATGATTATTGCGAATGCTGGGGATTGTCGAGCTGTTCTGGGGAGGAGGGGGAAGGCTATCGAGGTGTCGAAGGATCACAAGCCCAACTGTGCTTCTGAAAAGCTCAGAATTGAGAAACTGGGTGGGGTGATCTATGATGGGTACCTCAATGGCCAGCTCTCTGTTGCACGTGCTATAGGAGATTGGCACATGAAAGGTGCTAAGGGTTCTGCTTGCCCACTGAGTGCCGAGCCAGAGCTGCAGGAACTGAATTTGACGGAGGAAGATGAATTTCTTATAATGGGATGCGATGGGCTTTGGGATGTGATGAGCAGCCAGTATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCAGAAAGGTGTTCAAGAGAGCTGGTAAGAGAGGCACTAAAGCGCAATACATGCGATAATTTAACTGTTATTGTGGTCTGTTTTTCGGCTGATCCGCCCCCTCGGATAGAAATTCCTCAAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAGGGTGTATTGGACTGCAATTCTTGA | 1161 | 45.74 | MATGIDFSPPFTLLEGGGYNKDNVSATDDESSDSFNSLKQMSSGKPPRHLSVMRHSLSSIKLLGQADLSLDAETLGNKSPDGKAGYLPVFRSGSCSERGPKQYMEDEHICIDDLVEHVHACADFTSPGAFYGVFDGHGGTDAAAFVRKNILRFIVEDSCFPISVEKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELNLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPQTRVRRSISLEGLNLLKGVLDCNS | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31539920 | 31543214 | - | CaPI482276_11g019020.1 | Cam11g1902 | 140824 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1902 | 386 | MobiDBLite | consensus disorder prediction | 29 | 44 | - | - | |
Cam11g1902 | 386 | ProSitePatterns | PPM-type phosphatase domain signature. | 130 | 138 | IPR000222 | GO:0043169(InterPro) | |
Cam11g1902 | 386 | Gene3D | - | 76 | 354 | IPR036457 | - | |
Cam11g1902 | 386 | SUPERFAMILY | PP2C-like | 85 | 352 | IPR036457 | - | |
Cam11g1902 | 386 | SMART | PP2C_SIG_2 | 106 | 351 | IPR001932 | - | |
Cam11g1902 | 386 | PANTHER | PROTEIN PHOSPHATASE 2C | 68 | 351 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Cam11g1902 | 386 | MobiDBLite | consensus disorder prediction | 18 | 49 | - | - | |
Cam11g1902 | 386 | SMART | PP2C_4 | 81 | 349 | IPR001932 | - | |
Cam11g1902 | 386 | ProSiteProfiles | PPM-type phosphatase domain profile. | 91 | 351 | IPR001932 | - | |
Cam11g1902 | 386 | Pfam | Protein phosphatase 2C | 92 | 343 | IPR001932 | - | |
Cam11g1902 | 386 | CDD | PP2Cc | 90 | 351 | IPR001932 | - | |
Cam11g1902 | 386 | FunFam | Probable protein phosphatase 2C 22 | 76 | 354 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1773 | Cam-Chr2:30886551 | Cam11g1902 | Cam-Chr11:31539920 | 1.10E-88 | dispersed | |
Cam06g0425 | Cam-Chr6:6378151 | Cam11g1902 | Cam-Chr11:31539920 | 6.30E-81 | dispersed | |
Cam11g1902 | Cam-Chr11:31539920 | Cam09g0478 | Cam-Chr9:4938292 | 1.30E-89 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1902 | K14803 | - | csv:101205355 | 764.222 |