Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1914 | ATGGGGCTCAAAGTGCTTTCCGCTCTCGACACTGCCAAAACCCAATTGTACCATTTCAAGGCCATCGTCATCGCCGGGATGGGCCTCTTCACCGACGCCTACGATCTCTTCAGTATCACTCCCATTATGACTCTCCTCGGACGTGTCTATTACCCTGACCAACACTACGACATTCCGGCCGCCGTCAAATCCGCTATGCTCGCGGTGGCTCTTCTGGGGACGGCGATGGGTCAACTGGTGTTTGGCATACTCGGAGACAGAGTGGGAAGGCGGCGCGTGTACGGACTCGCATTGGCGCTCATGGTGGTGAGTTCCATCGACTGTGGATTCTCAATCTGCACCACCAGGAGCTGTGTCCTTGTGAGCCTAGGGTTTTTCAGGTTCCTTCTGGGGCTGGGAATTGGGGGAGATTACCCATTGTCGGCGACCATAATGTCGGAGTTCGCTAACAAGAAGACACGTGGAGCGTTCATAGCGGCGGTGTTCTCGATGCAGGGATTCGGGATCTTGGCCAGCGCCACCGTCACCATGATCGTCTGCTCCATATTCGATCGGGCCTCTAACTACCCAACCAGTGATCGTACTCCGATGGGGGCCGATATTGCTTGGAGGCTGATTCTCATGCTCGGCGCTGTGCCGGCGGCGATGACTTATTATTGGCGAATGATGATGCCGGAAACTGCCAGATACACGGCTCTGGTTGAGAGGAATGTGGAACAAGCGGCAAAGGATATGGAAAAAGTGTTGGATGTGTCGTTGGTTGATATCACGGAAGACAGCCCTGTGCCCCCTTCTCCCCCAAATTTCTCCTTCTTTTCCAACCAATTTCTTCGCCGCCATGGCCGCGATCTCCTTTCCTGTGCCGCCTCCTGGTTCCTCGTCGACATCGTCTTCTACAGCAGCAACCTCTTCCAATCCAAAATCTACACCCAATTCCTTCCTTCCAACCAAAAATCCATCAACGTCTACCGTCAAGCCTTCAACGAAGCCAGACTCCAAGCCATCGTCGCCGTCTGTTCCACCATTCCTGGCTACTGGATCTCCGTCTTTTTCATCGACCGTCTCGGCCGAGTCACCATCCAAATCCTCGGATTTCTCTTCATGGCCCTCGGCTATCTCCTCATCGCCATCCCCTACAACTCTTTCTGGGTCTCCGATAAACACAAATACGGTTTCATGCTATTCTACTGCCTCACATTCTTCTTCTCAAATTTCGGCCCCAACACCACCACTTTCATTCTCCCCGCCGAGCTCTTTCCCGCTAGGTTCCGTTCCACCTGCCATGGAATCTCCGGCGCCGCCGGCAAAATCGGGGCCATCATCGGAGCCGTGGGCTTCCTGTGGGCCTCGCACGACCGGAAGGACGGCGGAATTGGGATGAAGGCATCGTTGATGTTGCTTGGTGGGGTGAGTCTTGCGGGAGTGGCGGTCACGTATTTCTTCACCAGAGAAACCAATGGAAGGTCGTTGGAAGAGAATGAGAAGGAAGATGAATACGCTGGGATTTTGTTTCTCAGGTGCTTTCACTTTCACCCTCACCCTCACCCTCACCACGCTACTGCTACTGCCTACTCCCGCCCGTCTGTTGCTCAACACGACGACATGTCGTCACGTTCTACCTCCAACTCCATTCCAACTACTACCACTCCAATTCATTATTAG | 1662 | 53.91 | MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPIMTLLGRVYYPDQHYDIPAAVKSAMLAVALLGTAMGQLVFGILGDRVGRRRVYGLALALMVVSSIDCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASATVTMIVCSIFDRASNYPTSDRTPMGADIAWRLILMLGAVPAAMTYYWRMMMPETARYTALVERNVEQAAKDMEKVLDVSLVDITEDSPVPPSPPNFSFFSNQFLRRHGRDLLSCAASWFLVDIVFYSSNLFQSKIYTQFLPSNQKSINVYRQAFNEARLQAIVAVCSTIPGYWISVFFIDRLGRVTIQILGFLFMALGYLLIAIPYNSFWVSDKHKYGFMLFYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKIGAIIGAVGFLWASHDRKDGGIGMKASLMLLGGVSLAGVAVTYFFTRETNGRSLEENEKEDEYAGILFLRCFHFHPHPHPHHATATAYSRPSVAQHDDMSSRSTSNSIPTTTTPIHY | 553 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31597549 | 31600115 | - | CaPI482276_11g019140.1 | Cam11g1914 | 140836 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1914 | 553 | ProSitePatterns | Sugar transport proteins signature 2. | 129 | 154 | IPR005829 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cam11g1914 | 553 | FunFam | Inorganic phosphate transporter 1-6 | 17 | 501 | - | - | |
Cam11g1914 | 553 | CDD | MFS_PhT | 22 | 485 | - | - | |
Cam11g1914 | 553 | Gene3D | MFS general substrate transporter like domains | 17 | 502 | IPR036259 | - | |
Cam11g1914 | 553 | Pfam | Sugar (and other) transporter | 23 | 494 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cam11g1914 | 553 | MobiDBLite | consensus disorder prediction | 526 | 553 | - | - | |
Cam11g1914 | 553 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 6 | 493 | - | - | |
Cam11g1914 | 553 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 21 | 486 | IPR020846 | GO:0022857(InterPro) | |
Cam11g1914 | 553 | SUPERFAMILY | MFS general substrate transporter | 9 | 497 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g0099 | Cam-Chr7:2148986 | Cam11g1914 | Cam-Chr11:31597549 | 3.60E-141 | dispersed | |
Cam08g0983 | Cam-Chr8:15817507 | Cam11g1914 | Cam-Chr11:31597549 | 1.50E-136 | dispersed | |
Cam11g1914 | Cam-Chr11:31597549 | Cam05g0488 | Cam-Chr5:4307355 | 1.40E-140 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1914 | K08176 | - | csv:101218554 | 917.531 |