Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1918 ATGGAGAAGGGGCCGACCACTGTTTCAGCAATGGAAGCGTTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTACGGCAAAGTTTATAGGGCCAGGGAGAAGGCGACCGGCAAGATTGTGGCGCTCAAGAAGACGCGCCTCCATGAGGATGAGGAAGGTGTTCCTCCCACCACTCTCAGAGAGGTTTCAATTCTTCGAATGCTTTCTCGGGATCCCCATATTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGGAAAACCGTCCTTTACTTGGTGTTTGAATACATGGATACTGATCTGAAGAAATTCATCAAGAGTTTCCGTCAAACGGGAGAAAACATTCCCGTTAACACTGTCAAGAGTTTGATGTACCAACTCTGTAAGGGCGTTGCCTTCTGCCATGGTCATGGAATCCTGCACAGGGACCTGAAACCACACAATCTCTTGATGGACCGAAAGACAATGATGCTCAAAATTGCAGACCTTGGGTTGGCTCGAGCATTTACTGTGCCAATTAAGAAGTATACTCATGAGATACTGACCCTCTGGTATAGAGCTCCCGAAGTTTTGTTGGGGGCAACTCATTACTCCACAGCTGTAGATATGTGGTCTGTTGCCTGCATATTCGCCGAACTTGCCACCAAGCAGGCTCTCTTTCCTGGAGACTCTGAGTTGCAACAGCTCCTTCATATCTTCAGGCTATTAGGAACCCCAAATGAAAAGATCTGGCCTGGTGTGAGCAAACTAATGAACTGGCATGAATATCCCCAGTGGAGCCCCCAAAGCCTTTCAACTGCTGTCCCCAACTTGGATGATAAAGGGCTAGATCTGCTTTCACAAATGTTGAGGTATGAACCTTCAACGCGTATTTCAGCAAAGAAAGCAATGGAACATCCTTATTTTGATGACTTGAACAAGGAATATCTCTGA 939 46.75 MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVACIFAELATKQALFPGDSELQQLLHIFRLLGTPNEKIWPGVSKLMNWHEYPQWSPQSLSTAVPNLDDKGLDLLSQMLRYEPSTRISAKKAMEHPYFDDLNKEYL 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31614992 31616864 + CaPI482276_11g019180.1 Cam11g1918 140840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1918 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524(InterPro)
Cam11g1918 312 SMART serkin_6 14 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1918 312 FunFam Cyclin-dependent kinase 2 102 311 - -
Cam11g1918 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1918 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g1918 312 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Cam11g1918 312 PANTHER CELL DIVISION PROTEIN KINASE 14 304 IPR050108 GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)
Cam11g1918 312 SUPERFAMILY Protein kinase-like (PK-like) 9 308 IPR011009 -
Cam11g1918 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g1918 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Cam11g1918 312 FunFam Cyclin-dependent kinase B2,2 10 100 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0610 Cam-Chr4:20016442 Cam11g1918 Cam-Chr11:31614992 3.00E-121 dispersed
Cam05g2367 Cam-Chr5:31771415 Cam11g1918 Cam-Chr11:31614992 7.90E-95 dispersed
Cam08g2113 Cam-Chr8:26558287 Cam11g1918 Cam-Chr11:31614992 2.70E-35 dispersed
Cam10g0105 Cam-Chr10:2630150 Cam11g1918 Cam-Chr11:31614992 1.80E-51 dispersed
Cam10g1276 Cam-Chr10:26177580 Cam11g1918 Cam-Chr11:31614992 1.20E-43 dispersed
Cam11g1415 Cam-Chr11:26857887 Cam11g1918 Cam-Chr11:31614992 5.30E-70 dispersed
Cam11g1918 Cam-Chr11:31614992 Cam01g2440 Cam-Chr1:36237602 1.50E-43 dispersed
Cam11g1918 Cam-Chr11:31614992 Cam02g1691 Cam-Chr2:29917626 1.60E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85606 PF00069 Pkinase 7.50E-71 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1918 K07760 - csv:101208001 624.78