Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1922 ATGGCGACGATGGCGATGAAGGGCAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTTCACGGAACTGTCAGGGAGCCTAGCGATGCTAAGTATGATCACTTGAGAAAACTTGAGAAAGCGACCGAGAATTTGGAACTGTTTAAGGCTGATTTGCTGAACTACGAGTCTCTGCGTTCAGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCCACAACTTCATCAAACCCCGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTCGAAGCAAAAATTAAGCGAGTAGTTGTAGTATCCTCAGCCGCTGCAGTGTTTTTCAATCCCAGTTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCCGATATGGAGCACTGCAGAGCTACTAAGAACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTCGACGTTGTGACTATGTGTCCTACTCTCGTTATCGGGCCGGTTTTGCAGGCAACAGTCAACGCCAGCAGCTTGGTCCTTCTCAAAATTCTAAAAGAAGGATGTGAGTCGATGGAAAACAGGCTACGGATGTTAGTAGACGTACGAGATGTAGCAGAGGCGCTAGTTCTTTTATATGAGAAGGGGGAGGCAGAAGGAAGGTATATCTGTACCGCGCATACAATTGAGACAAGGGAGCTGGTGGATGCATTGAAGAGGAAGTACCCTGATTATAGCTATCCAAAGAAGTTGATTGAAGGGAAGGCGGAGTCGGTAAGTCTGAGCTCGGAGAAGCTGCAAAGATTGGGTTGGAAGTATCGGGCGTTAGAGGACACGCTTGTGGATGCTGTCCAGAGTTTCAAAGACGCCGGCATGTTGGAGTGA 969 47.47 MATMAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKATENLELFKADLLNYESLRSAIAGCDGVFHVACPVPSTTSSNPETEVIEPAVKGTHNVLEACVEAKIKRVVVVSSAAAVFFNPSWPQGRVMDESCWSDMEHCRATKNWYFLAKTKAESEALEFGRRCGLDVVTMCPTLVIGPVLQATVNASSLVLLKILKEGCESMENRLRMLVDVRDVAEALVLLYEKGEAEGRYICTAHTIETRELVDALKRKYPDYSYPKKLIEGKAESVSLSSEKLQRLGWKYRALEDTLVDAVQSFKDAGMLE 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31634104 31636994 + CaPI482276_11g019220.1 Cam11g1922 140844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1922 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 313 IPR050425 GO:0016616(PANTHER)
Cam11g1922 322 Coils Coil 52 72 - -
Cam11g1922 322 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 322 - -
Cam11g1922 322 Gene3D - 2 322 - -
Cam11g1922 322 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Cam11g1922 322 CDD FR_SDR_e 10 299 - -
Cam11g1922 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 316 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0187 Cam-Chr6:3715589 Cam11g1922 Cam-Chr11:31634104 2.50E-49 dispersed
Cam08g1426 Cam-Chr8:20535077 Cam11g1922 Cam-Chr11:31634104 5.20E-08 dispersed
Cam10g1379 Cam-Chr10:27362776 Cam11g1922 Cam-Chr11:31634104 1.10E-73 dispersed
Cam10g1380 Cam-Chr10:27374307 Cam11g1922 Cam-Chr11:31634104 4.10E-69 dispersed
Cam11g1922 Cam-Chr11:31634104 Cam09g0326 Cam-Chr9:3619736 1.50E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1922 - - - 0.0