Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1922 | ATGGCGACGATGGCGATGAAGGGCAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTTCACGGAACTGTCAGGGAGCCTAGCGATGCTAAGTATGATCACTTGAGAAAACTTGAGAAAGCGACCGAGAATTTGGAACTGTTTAAGGCTGATTTGCTGAACTACGAGTCTCTGCGTTCAGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCCACAACTTCATCAAACCCCGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTCGAAGCAAAAATTAAGCGAGTAGTTGTAGTATCCTCAGCCGCTGCAGTGTTTTTCAATCCCAGTTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCCGATATGGAGCACTGCAGAGCTACTAAGAACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTCGACGTTGTGACTATGTGTCCTACTCTCGTTATCGGGCCGGTTTTGCAGGCAACAGTCAACGCCAGCAGCTTGGTCCTTCTCAAAATTCTAAAAGAAGGATGTGAGTCGATGGAAAACAGGCTACGGATGTTAGTAGACGTACGAGATGTAGCAGAGGCGCTAGTTCTTTTATATGAGAAGGGGGAGGCAGAAGGAAGGTATATCTGTACCGCGCATACAATTGAGACAAGGGAGCTGGTGGATGCATTGAAGAGGAAGTACCCTGATTATAGCTATCCAAAGAAGTTGATTGAAGGGAAGGCGGAGTCGGTAAGTCTGAGCTCGGAGAAGCTGCAAAGATTGGGTTGGAAGTATCGGGCGTTAGAGGACACGCTTGTGGATGCTGTCCAGAGTTTCAAAGACGCCGGCATGTTGGAGTGA | 969 | 47.47 | MATMAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKATENLELFKADLLNYESLRSAIAGCDGVFHVACPVPSTTSSNPETEVIEPAVKGTHNVLEACVEAKIKRVVVVSSAAAVFFNPSWPQGRVMDESCWSDMEHCRATKNWYFLAKTKAESEALEFGRRCGLDVVTMCPTLVIGPVLQATVNASSLVLLKILKEGCESMENRLRMLVDVRDVAEALVLLYEKGEAEGRYICTAHTIETRELVDALKRKYPDYSYPKKLIEGKAESVSLSSEKLQRLGWKYRALEDTLVDAVQSFKDAGMLE | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31634104 | 31636994 | + | CaPI482276_11g019220.1 | Cam11g1922 | 140844 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1922 | 322 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 9 | 313 | IPR050425 | GO:0016616(PANTHER) | |
Cam11g1922 | 322 | Coils | Coil | 52 | 72 | - | - | |
Cam11g1922 | 322 | FunFam | NAD(P)-binding Rossmann-fold superfamily protein | 3 | 322 | - | - | |
Cam11g1922 | 322 | Gene3D | - | 2 | 322 | - | - | |
Cam11g1922 | 322 | Pfam | NAD dependent epimerase/dehydratase family | 10 | 246 | IPR001509 | - | |
Cam11g1922 | 322 | CDD | FR_SDR_e | 10 | 299 | - | - | |
Cam11g1922 | 322 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 3 | 316 | IPR036291 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam06g0187 | Cam-Chr6:3715589 | Cam11g1922 | Cam-Chr11:31634104 | 2.50E-49 | dispersed | |
Cam08g1426 | Cam-Chr8:20535077 | Cam11g1922 | Cam-Chr11:31634104 | 5.20E-08 | dispersed | |
Cam10g1379 | Cam-Chr10:27362776 | Cam11g1922 | Cam-Chr11:31634104 | 1.10E-73 | dispersed | |
Cam10g1380 | Cam-Chr10:27374307 | Cam11g1922 | Cam-Chr11:31634104 | 4.10E-69 | dispersed | |
Cam11g1922 | Cam-Chr11:31634104 | Cam09g0326 | Cam-Chr9:3619736 | 1.50E-75 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1922 | - | - | - | 0.0 |